Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PACS2Q86VP3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.14■□□□□ 0.82
PACS2Q86VP3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PACS2Q86VP3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PACS2Q86VP3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PACS2Q86VP3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
PACS2Q86VP3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PACS2Q86VP3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 AL390961.4-201ENST00000623958 2535 ntBASIC20.13■□□□□ 0.81
PACS2Q86VP3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 AC010525.1-201ENST00000585559 441 ntBASIC20.13■□□□□ 0.81
PACS2Q86VP3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.13■□□□□ 0.81
PACS2Q86VP3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS2Q86VP3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS2Q86VP3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
PACS2Q86VP3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 AC093484.2-201ENST00000580996 2166 ntBASIC20.11■□□□□ 0.81
PACS2Q86VP3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.11■□□□□ 0.81
PACS2Q86VP3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.11■□□□□ 0.81
PACS2Q86VP3 AC079598.2-202ENST00000546624 1451 ntBASIC20.11■□□□□ 0.81
PACS2Q86VP3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PACS2Q86VP3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms