Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF220Q5VTB9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF220Q5VTB9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF220Q5VTB9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.31■□□□□ 0.68
RNF220Q5VTB9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 EEF1DP3-203ENST00000566025 782 ntBASIC19.31■□□□□ 0.68
RNF220Q5VTB9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF220Q5VTB9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 AC053503.5-201ENST00000601508 636 ntBASIC19.3■□□□□ 0.68
RNF220Q5VTB9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF220Q5VTB9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 AC125437.2-201ENST00000625180 2167 ntBASIC19.29■□□□□ 0.68
RNF220Q5VTB9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF220Q5VTB9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 IRS3P-201ENST00000223076 1006 ntBASIC19.28■□□□□ 0.68
RNF220Q5VTB9 AC105265.2-201ENST00000467189 838 ntBASIC19.28■□□□□ 0.68
RNF220Q5VTB9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF220Q5VTB9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms