Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 DUX4L18-201ENST00000553347 1267 ntBASIC10.09□□□□□ -0.79
LINC01554Q52M75 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 LINC01006-201ENST00000333319 2292 ntBASIC10.09□□□□□ -0.79
LINC01554Q52M75 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.09□□□□□ -0.79
LINC01554Q52M75 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LINC01554Q52M75 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 GAK-223ENST00000628912 497 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC01554Q52M75 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC01554Q52M75 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 AC079630.1-202ENST00000618127 1840 ntBASIC10.07□□□□□ -0.8
LINC01554Q52M75 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 AC126755.1-201ENST00000525846 6405 ntBASIC10.07□□□□□ -0.8
LINC01554Q52M75 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms