Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 YBX1P2-201ENST00000489612 999 ntBASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 AL356652.1-201ENST00000615962 565 ntBASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO4Q2I0M5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 INGX-201ENST00000359239 846 ntBASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 PVRIG2P-201ENST00000435460 978 ntBASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 AP005242.2-201ENST00000580065 1175 ntBASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 AL121906.2-201ENST00000621597 723 ntBASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 AC012313.10-201ENST00000623509 926 ntBASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO4Q2I0M5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RSPO4Q2I0M5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RSPO4Q2I0M5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.58■□□□□ 0.73
RSPO4Q2I0M5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RSPO4Q2I0M5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RSPO4Q2I0M5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RSPO4Q2I0M5 AC139530.1-201ENST00000575312 1977 ntBASIC19.58■□□□□ 0.73
RSPO4Q2I0M5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.58■□□□□ 0.72
RSPO4Q2I0M5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 AC068473.5-201ENST00000616428 2072 ntBASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 AC023511.2-201ENST00000618803 211 ntBASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO4Q2I0M5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 FSCN1P1-201ENST00000568912 1481 ntBASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 HMGA1P5-201ENST00000412453 271 ntBASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 KRT18P16-201ENST00000510337 1294 ntBASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RSPO4Q2I0M5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms