Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL20P78556 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.84■□□□□ 0.13
CCL20P78556 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.84■□□□□ 0.13
CCL20P78556 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.84■□□□□ 0.13
CCL20P78556 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL20P78556 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL20P78556 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL20P78556 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CCL20P78556 AC055733.4-201ENST00000638462 1354 ntBASIC15.84■□□□□ 0.13
CCL20P78556 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL20P78556 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.84■□□□□ 0.13
CCL20P78556 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCL20P78556 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL20P78556 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
CCL20P78556 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCL20P78556 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CCL20P78556 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CCL20P78556 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCL20P78556 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCL20P78556 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CCL20P78556 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCL20P78556 AC009113.1-201ENST00000570267 2443 ntBASIC15.83■□□□□ 0.12
CCL20P78556 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 MIR3181-201ENST00000578512 73 ntBASIC15.83■□□□□ 0.12
CCL20P78556 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCL20P78556 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCL20P78556 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL20P78556 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.83■□□□□ 0.12
CCL20P78556 AL032819.2-201ENST00000624543 2162 ntBASIC15.83■□□□□ 0.12
CCL20P78556 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
CCL20P78556 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.83■□□□□ 0.12
CCL20P78556 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL20P78556 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL20P78556 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL20P78556 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL20P78556 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.82■□□□□ 0.12
CCL20P78556 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL20P78556 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.82■□□□□ 0.12
CCL20P78556 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL20P78556 MTDHP2-201ENST00000601468 714 ntBASIC15.82■□□□□ 0.12
CCL20P78556 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 KRT8P33-201ENST00000508125 1423 ntBASIC15.82■□□□□ 0.12
CCL20P78556 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL20P78556 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL20P78556 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL20P78556 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL20P78556 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 AL390961.4-201ENST00000623958 2535 ntBASIC15.82■□□□□ 0.12
CCL20P78556 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL20P78556 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL20P78556 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCL20P78556 CROCCP3-202ENST00000420820 1947 ntBASIC15.81■□□□□ 0.12
CCL20P78556 BX664725.1-201ENST00000438252 379 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms