Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.27■□□□□ 0.84
LIMK2P53671 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.27■□□□□ 0.84
LIMK2P53671 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
LIMK2P53671 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LIMK2P53671 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.27■□□□□ 0.84
LIMK2P53671 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LIMK2P53671 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LIMK2P53671 TMEM191A-211ENST00000637163 1067 ntBASIC20.27■□□□□ 0.84
LIMK2P53671 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.27■□□□□ 0.84
LIMK2P53671 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LIMK2P53671 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LIMK2P53671 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LIMK2P53671 KRT8P36-201ENST00000489121 1440 ntBASIC20.27■□□□□ 0.83
LIMK2P53671 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK2P53671 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.26■□□□□ 0.83
LIMK2P53671 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK2P53671 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK2P53671 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK2P53671 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LIMK2P53671 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK2P53671 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK2P53671 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.26■□□□□ 0.83
LIMK2P53671 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.26■□□□□ 0.83
LIMK2P53671 MIR4758-201ENST00000577688 71 ntBASIC20.26■□□□□ 0.83
LIMK2P53671 AC069236.1-201ENST00000604339 616 ntBASIC20.26■□□□□ 0.83
LIMK2P53671 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.26■□□□□ 0.83
LIMK2P53671 AC008694.1-202ENST00000636953 945 ntBASIC20.26■□□□□ 0.83
LIMK2P53671 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.26■□□□□ 0.83
LIMK2P53671 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK2P53671 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LIMK2P53671 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK2P53671 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LIMK2P53671 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
LIMK2P53671 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LIMK2P53671 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LIMK2P53671 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LIMK2P53671 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LIMK2P53671 AL512625.2-201ENST00000417533 625 ntBASIC20.25■□□□□ 0.83
LIMK2P53671 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
LIMK2P53671 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.25■□□□□ 0.83
LIMK2P53671 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.25■□□□□ 0.83
LIMK2P53671 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.25■□□□□ 0.83
LIMK2P53671 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.25■□□□□ 0.83
LIMK2P53671 MKRN4P-201ENST00000444706 1521 ntBASIC20.25■□□□□ 0.83
LIMK2P53671 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LIMK2P53671 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LIMK2P53671 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LIMK2P53671 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.25■□□□□ 0.83
LIMK2P53671 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.24■□□□□ 0.83
LIMK2P53671 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.24■□□□□ 0.83
LIMK2P53671 MIPEPP3-201ENST00000412105 444 ntBASIC20.24■□□□□ 0.83
LIMK2P53671 TSPY20P-201ENST00000450910 630 ntBASIC20.24■□□□□ 0.83
LIMK2P53671 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 AC098934.4-201ENST00000564127 592 ntBASIC20.24■□□□□ 0.83
LIMK2P53671 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.24■□□□□ 0.83
LIMK2P53671 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.24■□□□□ 0.83
LIMK2P53671 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LIMK2P53671 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.24■□□□□ 0.83
LIMK2P53671 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LIMK2P53671 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LIMK2P53671 AC007952.6-201ENST00000573168 2673 ntBASIC20.23■□□□□ 0.83
LIMK2P53671 AC003957.1-201ENST00000625108 2673 ntBASIC20.23■□□□□ 0.83
LIMK2P53671 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.23■□□□□ 0.83
LIMK2P53671 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.23■□□□□ 0.83
LIMK2P53671 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.23■□□□□ 0.83
LIMK2P53671 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.23■□□□□ 0.83
LIMK2P53671 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LIMK2P53671 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.23■□□□□ 0.83
LIMK2P53671 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
LIMK2P53671 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.23■□□□□ 0.83
LIMK2P53671 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.23■□□□□ 0.83
LIMK2P53671 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms