Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK9P50750 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK9P50750 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK9P50750 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDK9P50750 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK9P50750 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK9P50750 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDK9P50750 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDK9P50750 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
CDK9P50750 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK9P50750 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDK9P50750 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDK9P50750 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK9P50750 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDK9P50750 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK9P50750 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CDK9P50750 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDK9P50750 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDK9P50750 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDK9P50750 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK9P50750 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK9P50750 SLC7A5P1-201ENST00000568957 537 ntBASIC19.31■□□□□ 0.68
CDK9P50750 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDK9P50750 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK9P50750 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK9P50750 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK9P50750 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.3■□□□□ 0.68
CDK9P50750 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.3■□□□□ 0.68
CDK9P50750 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK9P50750 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.3■□□□□ 0.68
CDK9P50750 AC116050.2-201ENST00000612102 1779 ntBASIC19.3■□□□□ 0.68
CDK9P50750 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 AC091799.1-201ENST00000422823 811 ntBASIC19.3■□□□□ 0.68
CDK9P50750 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK9P50750 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK9P50750 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK9P50750 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.3■□□□□ 0.68
CDK9P50750 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
CDK9P50750 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK9P50750 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.3■□□□□ 0.68
CDK9P50750 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK9P50750 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK9P50750 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK9P50750 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDK9P50750 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDK9P50750 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.29■□□□□ 0.68
CDK9P50750 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 KRT18P11-201ENST00000435214 1283 ntBASIC19.29■□□□□ 0.68
CDK9P50750 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.29■□□□□ 0.68
CDK9P50750 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK9P50750 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDK9P50750 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.29■□□□□ 0.68
CDK9P50750 AC243732.1-201ENST00000612648 864 ntBASIC19.29■□□□□ 0.68
CDK9P50750 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK9P50750 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK9P50750 MYCNOS-205ENST00000641950 531 ntBASIC19.29■□□□□ 0.68
CDK9P50750 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK9P50750 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK9P50750 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDK9P50750 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK9P50750 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK9P50750 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.29■□□□□ 0.68
CDK9P50750 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms