Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.67■□□□□ 0.42
CX3CR1P49238 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.67■□□□□ 0.42
CX3CR1P49238 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.67■□□□□ 0.42
CX3CR1P49238 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CX3CR1P49238 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CX3CR1P49238 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CX3CR1P49238 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CX3CR1P49238 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CX3CR1P49238 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.66■□□□□ 0.42
CX3CR1P49238 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.66■□□□□ 0.42
CX3CR1P49238 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CX3CR1P49238 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CX3CR1P49238 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CX3CR1P49238 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.66■□□□□ 0.42
CX3CR1P49238 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.66■□□□□ 0.42
CX3CR1P49238 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.66■□□□□ 0.42
CX3CR1P49238 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.66■□□□□ 0.42
CX3CR1P49238 MFSD11-216ENST00000590393 1141 ntBASIC17.66■□□□□ 0.42
CX3CR1P49238 AL356652.1-201ENST00000615962 565 ntBASIC17.66■□□□□ 0.42
CX3CR1P49238 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
CX3CR1P49238 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
CX3CR1P49238 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.66■□□□□ 0.42
CX3CR1P49238 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CX3CR1P49238 AFG3L1P-217ENST00000557444 2447 ntBASIC17.66■□□□□ 0.42
CX3CR1P49238 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.65■□□□□ 0.42
CX3CR1P49238 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.65■□□□□ 0.42
CX3CR1P49238 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.65■□□□□ 0.42
CX3CR1P49238 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.65■□□□□ 0.42
CX3CR1P49238 AC026271.2-201ENST00000428091 497 ntBASIC17.65■□□□□ 0.42
CX3CR1P49238 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.65■□□□□ 0.42
CX3CR1P49238 AL162412.1-201ENST00000567129 965 ntBASIC17.65■□□□□ 0.42
CX3CR1P49238 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.65■□□□□ 0.42
CX3CR1P49238 AC016405.3-201ENST00000607710 860 ntBASIC17.65■□□□□ 0.42
CX3CR1P49238 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CX3CR1P49238 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.65■□□□□ 0.42
CX3CR1P49238 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.65■□□□□ 0.42
CX3CR1P49238 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CX3CR1P49238 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CX3CR1P49238 TCF3P1-201ENST00000423021 1937 ntBASIC17.64■□□□□ 0.42
CX3CR1P49238 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CX3CR1P49238 CYP21A1P-202ENST00000354927 1481 ntBASIC17.64■□□□□ 0.41
CX3CR1P49238 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CX3CR1P49238 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CR1P49238 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CR1P49238 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CR1P49238 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CR1P49238 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CR1P49238 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CR1P49238 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.64■□□□□ 0.41
CX3CR1P49238 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.64■□□□□ 0.41
CX3CR1P49238 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CX3CR1P49238 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CR1P49238 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.64■□□□□ 0.41
CX3CR1P49238 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.64■□□□□ 0.41
CX3CR1P49238 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CR1P49238 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CR1P49238 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CR1P49238 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CX3CR1P49238 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.63■□□□□ 0.41
CX3CR1P49238 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CX3CR1P49238 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.63■□□□□ 0.41
CX3CR1P49238 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CR1P49238 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CR1P49238 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CX3CR1P49238 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.63■□□□□ 0.41
CX3CR1P49238 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CX3CR1P49238 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CR1P49238 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CX3CR1P49238 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CR1P49238 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.63■□□□□ 0.41
CX3CR1P49238 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.63■□□□□ 0.41
CX3CR1P49238 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CX3CR1P49238 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CR1P49238 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CR1P49238 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CR1P49238 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CR1P49238 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.62■□□□□ 0.41
CX3CR1P49238 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.62■□□□□ 0.41
CX3CR1P49238 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CX3CR1P49238 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CR1P49238 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CR1P49238 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CR1P49238 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms