Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.91■□□□□ 0.46
CSNK1A1P48729 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1A1P48729 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1A1P48729 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CSNK1A1P48729 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1A1P48729 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1A1P48729 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1A1P48729 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1A1P48729 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 KRT17P1-201ENST00000399211 1546 ntBASIC17.9■□□□□ 0.46
CSNK1A1P48729 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.9■□□□□ 0.46
CSNK1A1P48729 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1A1P48729 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.89■□□□□ 0.46
CSNK1A1P48729 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSNK1A1P48729 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1A1P48729 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1A1P48729 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1A1P48729 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CSNK1A1P48729 BX276092.2-201ENST00000417668 665 ntBASIC17.89■□□□□ 0.45
CSNK1A1P48729 AC083906.2-201ENST00000511578 360 ntBASIC17.89■□□□□ 0.45
CSNK1A1P48729 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.89■□□□□ 0.45
CSNK1A1P48729 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1A1P48729 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.89■□□□□ 0.45
CSNK1A1P48729 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 AL162377.1-201ENST00000618844 1793 ntBASIC17.89■□□□□ 0.45
CSNK1A1P48729 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1A1P48729 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1A1P48729 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 SLC29A4P1-201ENST00000398760 971 ntBASIC17.88■□□□□ 0.45
CSNK1A1P48729 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.88■□□□□ 0.45
CSNK1A1P48729 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CSNK1A1P48729 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1A1P48729 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 GPX1P1-201ENST00000388829 606 ntBASIC17.87■□□□□ 0.45
CSNK1A1P48729 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1A1P48729 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CSNK1A1P48729 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms