Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A3P47895 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.29■■□□□ 1
ALDH1A3P47895 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.29■■□□□ 1
ALDH1A3P47895 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.29■■□□□ 1
ALDH1A3P47895 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.29■■□□□ 1
ALDH1A3P47895 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A3P47895 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A3P47895 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALDH1A3P47895 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
ALDH1A3P47895 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A3P47895 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.28■■□□□ 1
ALDH1A3P47895 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ALDH1A3P47895 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.28■■□□□ 1
ALDH1A3P47895 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
ALDH1A3P47895 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A3P47895 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A3P47895 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ALDH1A3P47895 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.28■■□□□ 1
ALDH1A3P47895 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 AL023875.1-201ENST00000640777 796 ntBASIC21.28■■□□□ 1
ALDH1A3P47895 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.28■■□□□ 1
ALDH1A3P47895 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALDH1A3P47895 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.27■■□□□ 1
ALDH1A3P47895 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.27■■□□□ 1
ALDH1A3P47895 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
ALDH1A3P47895 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.27■■□□□ 1
ALDH1A3P47895 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ALDH1A3P47895 AC239809.2-201ENST00000415381 517 ntBASIC21.27■■□□□ 1
ALDH1A3P47895 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.27■■□□□ 1
ALDH1A3P47895 AC023632.3-201ENST00000521633 145 ntBASIC21.27■■□□□ 1
ALDH1A3P47895 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
ALDH1A3P47895 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.27■■□□□ 1
ALDH1A3P47895 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.27■■□□□ 1
ALDH1A3P47895 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.27■■□□□ 1
ALDH1A3P47895 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
ALDH1A3P47895 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ALDH1A3P47895 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALDH1A3P47895 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ALDH1A3P47895 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALDH1A3P47895 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
ALDH1A3P47895 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ALDH1A3P47895 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 FEM1AP4-201ENST00000443167 1987 ntBASIC21.25■□□□□ 0.99
ALDH1A3P47895 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
ALDH1A3P47895 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.25■□□□□ 0.99
ALDH1A3P47895 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.25■□□□□ 0.99
ALDH1A3P47895 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.25■□□□□ 0.99
ALDH1A3P47895 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ALDH1A3P47895 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A3P47895 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
ALDH1A3P47895 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A3P47895 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.24■□□□□ 0.99
ALDH1A3P47895 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms