Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.12■□□□□ 0.97
MTHFRP42898 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.12■□□□□ 0.97
MTHFRP42898 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MTHFRP42898 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MTHFRP42898 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.12■□□□□ 0.97
MTHFRP42898 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MTHFRP42898 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MTHFRP42898 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.11■□□□□ 0.97
MTHFRP42898 UNC93B2-201ENST00000285383 730 ntBASIC21.11■□□□□ 0.97
MTHFRP42898 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.11■□□□□ 0.97
MTHFRP42898 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 NUDT16P1-203ENST00000513809 620 ntBASIC21.11■□□□□ 0.97
MTHFRP42898 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.11■□□□□ 0.97
MTHFRP42898 AC004264.1-201ENST00000608354 794 ntBASIC21.11■□□□□ 0.97
MTHFRP42898 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.11■□□□□ 0.97
MTHFRP42898 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MTHFRP42898 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MTHFRP42898 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MTHFRP42898 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.11■□□□□ 0.97
MTHFRP42898 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MTHFRP42898 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTHFRP42898 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MTHFRP42898 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MTHFRP42898 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.1■□□□□ 0.97
MTHFRP42898 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.1■□□□□ 0.97
MTHFRP42898 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.1■□□□□ 0.97
MTHFRP42898 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.1■□□□□ 0.97
MTHFRP42898 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 AL121906.2-201ENST00000621597 723 ntBASIC21.1■□□□□ 0.97
MTHFRP42898 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MTHFRP42898 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.1■□□□□ 0.97
MTHFRP42898 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MTHFRP42898 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTHFRP42898 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.1■□□□□ 0.97
MTHFRP42898 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MTHFRP42898 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTHFRP42898 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTHFRP42898 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MTHFRP42898 AC007375.3-201ENST00000600936 2314 ntBASIC21.09■□□□□ 0.97
MTHFRP42898 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MTHFRP42898 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.09■□□□□ 0.97
MTHFRP42898 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTHFRP42898 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTHFRP42898 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
MTHFRP42898 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.09■□□□□ 0.97
MTHFRP42898 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.09■□□□□ 0.97
MTHFRP42898 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
MTHFRP42898 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.09■□□□□ 0.97
MTHFRP42898 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTHFRP42898 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MTHFRP42898 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
MTHFRP42898 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MTHFRP42898 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.08■□□□□ 0.97
MTHFRP42898 AC005521.1-201ENST00000393351 872 ntBASIC21.08■□□□□ 0.97
MTHFRP42898 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.08■□□□□ 0.97
MTHFRP42898 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.08■□□□□ 0.97
MTHFRP42898 AP002982.1-201ENST00000492365 877 ntBASIC21.08■□□□□ 0.97
MTHFRP42898 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.08■□□□□ 0.97
MTHFRP42898 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
MTHFRP42898 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.08■□□□□ 0.97
MTHFRP42898 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.08■□□□□ 0.97
MTHFRP42898 AL031963.3-201ENST00000606441 850 ntBASIC21.08■□□□□ 0.97
MTHFRP42898 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.08■□□□□ 0.97
MTHFRP42898 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
MTHFRP42898 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
MTHFRP42898 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MTHFRP42898 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
MTHFRP42898 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.07■□□□□ 0.96
MTHFRP42898 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTHFRP42898 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms