Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.79□□□□□ -0.04
CKS2P33552 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.79□□□□□ -0.04
CKS2P33552 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CKS2P33552 AL033527.3-201ENST00000566366 1196 ntBASIC14.79□□□□□ -0.04
CKS2P33552 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.79□□□□□ -0.04
CKS2P33552 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CKS2P33552 MIR6724-1-201ENST00000616420 92 ntBASIC14.79□□□□□ -0.04
CKS2P33552 MIR6724-2-201ENST00000616483 92 ntBASIC14.79□□□□□ -0.04
CKS2P33552 MIR6724-4-201ENST00000617390 92 ntBASIC14.79□□□□□ -0.04
CKS2P33552 MIR6724-3-201ENST00000622482 92 ntBASIC14.79□□□□□ -0.04
CKS2P33552 AC012354.3-201ENST00000623734 483 ntBASIC14.79□□□□□ -0.04
CKS2P33552 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CKS2P33552 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CKS2P33552 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CKS2P33552 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.78□□□□□ -0.04
CKS2P33552 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.78□□□□□ -0.04
CKS2P33552 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.78□□□□□ -0.04
CKS2P33552 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.78□□□□□ -0.04
CKS2P33552 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.78□□□□□ -0.04
CKS2P33552 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 AC092171.4-201ENST00000609130 632 ntBASIC14.78□□□□□ -0.04
CKS2P33552 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.78□□□□□ -0.04
CKS2P33552 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.78□□□□□ -0.04
CKS2P33552 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS2P33552 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CKS2P33552 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.77□□□□□ -0.04
CKS2P33552 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.77□□□□□ -0.04
CKS2P33552 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS2P33552 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.77□□□□□ -0.04
CKS2P33552 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS2P33552 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CKS2P33552 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.77□□□□□ -0.04
CKS2P33552 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS2P33552 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS2P33552 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CKS2P33552 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS2P33552 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS2P33552 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CKS2P33552 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.77□□□□□ -0.05
CKS2P33552 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS2P33552 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.77□□□□□ -0.05
CKS2P33552 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CKS2P33552 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CKS2P33552 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CKS2P33552 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.76□□□□□ -0.05
CKS2P33552 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.76□□□□□ -0.05
CKS2P33552 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
CKS2P33552 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.76□□□□□ -0.05
CKS2P33552 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.76□□□□□ -0.05
CKS2P33552 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.76□□□□□ -0.05
CKS2P33552 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.76□□□□□ -0.05
CKS2P33552 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms