Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC28A2O43868 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A2O43868 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A2O43868 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A2O43868 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC28A2O43868 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC28A2O43868 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC28A2O43868 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC28A2O43868 BX088651.1-201ENST00000540551 451 ntBASIC19.35■□□□□ 0.69
SLC28A2O43868 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC28A2O43868 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC28A2O43868 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC28A2O43868 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A2O43868 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A2O43868 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC28A2O43868 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A2O43868 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC28A2O43868 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC28A2O43868 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC28A2O43868 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC28A2O43868 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLC28A2O43868 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC28A2O43868 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC28A2O43868 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC28A2O43868 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC28A2O43868 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SLC28A2O43868 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
SLC28A2O43868 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
SLC28A2O43868 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
SLC28A2O43868 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SLC28A2O43868 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A2O43868 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC28A2O43868 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SLC28A2O43868 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC28A2O43868 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC28A2O43868 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC28A2O43868 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC28A2O43868 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC28A2O43868 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC28A2O43868 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC28A2O43868 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC28A2O43868 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.33■□□□□ 0.68
SLC28A2O43868 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC28A2O43868 CYP2T3P-201ENST00000601990 817 ntBASIC19.33■□□□□ 0.68
SLC28A2O43868 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC28A2O43868 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC28A2O43868 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.33■□□□□ 0.68
SLC28A2O43868 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SLC28A2O43868 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC28A2O43868 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC28A2O43868 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC28A2O43868 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 AC092667.1-201ENST00000434301 2586 ntBASIC19.32■□□□□ 0.68
SLC28A2O43868 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SLC28A2O43868 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC28A2O43868 AC008175.2-201ENST00000612840 297 ntBASIC19.32■□□□□ 0.68
SLC28A2O43868 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 AC010980.2-201ENST00000587099 1412 ntBASIC19.32■□□□□ 0.68
SLC28A2O43868 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC28A2O43868 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC28A2O43868 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SLC28A2O43868 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms