Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 AC141586.5-201ENST00000624546 2050 ntBASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 SSR1P1-201ENST00000407630 814 ntBASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM238LA0A1B0GVL6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 AC093536.1-201ENST00000569153 554 ntBASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM238LA0A1B0GVL6 AC068418.2-201ENST00000577309 3703 ntBASIC14.08□□□□□ -0.15
TMEM238LA0A1B0GVL6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
TMEM238LA0A1B0GVL6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM238LA0A1B0GVL6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM238LA0A1B0GVL6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM238LA0A1B0GVL6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms