Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV6A0A075B6T7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 MIR4508-201ENST00000584178 70 ntBASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 TMEM179-206ENST00000616017 1645 ntBASIC17.21■□□□□ 0.35
TRAV6A0A075B6T7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV6A0A075B6T7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV6A0A075B6T7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.21■□□□□ 0.34
TRAV6A0A075B6T7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 TREX1-205ENST00000625293 1783 ntBASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV6A0A075B6T7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 AC021242.3-201ENST00000607598 1377 ntBASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 AC241377.3-202ENST00000626088 1088 ntBASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 AC241585.3-202ENST00000628937 1088 ntBASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 AC245100.8-202ENST00000629247 1058 ntBASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV6A0A075B6T7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms