Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 KRASP1-201ENST00000407852 552 ntBASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.77■□□□□ 0.76
NLGN3Q9NZ94 AC011484.1-201ENST00000377652 1995 ntBASIC19.77■□□□□ 0.75
NLGN3Q9NZ94 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.77■□□□□ 0.75
NLGN3Q9NZ94 KRT17P2-201ENST00000300992 1314 ntBASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 AL049637.2-201ENST00000641778 930 ntBASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NLGN3Q9NZ94 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 AC026310.3-201ENST00000625186 2373 ntBASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 REXO1L12P-201ENST00000622156 912 ntBASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NLGN3Q9NZ94 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 AC244015.2-201ENST00000616358 1861 ntBASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 PRKY-204ENST00000533551 1019 ntBASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLGN3Q9NZ94 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 TSPY7P-201ENST00000431358 1114 ntBASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 RARRES2P10-201ENST00000564312 460 ntBASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.73■□□□□ 0.75
NLGN3Q9NZ94 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms