Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
EFCC1Q9HA90 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.5■■□□□ 1.35
EFCC1Q9HA90 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
EFCC1Q9HA90 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 AF186192.3-201ENST00000583427 947 ntBASIC23.48■■□□□ 1.35
EFCC1Q9HA90 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
EFCC1Q9HA90 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 AL390719.1-204ENST00000412397 1219 ntBASIC23.47■■□□□ 1.35
EFCC1Q9HA90 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 KRT18P57-201ENST00000443599 1254 ntBASIC23.47■■□□□ 1.35
EFCC1Q9HA90 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
EFCC1Q9HA90 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.46■■□□□ 1.35
EFCC1Q9HA90 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
EFCC1Q9HA90 AC007375.3-201ENST00000600936 2314 ntBASIC23.45■■□□□ 1.35
EFCC1Q9HA90 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
EFCC1Q9HA90 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
EFCC1Q9HA90 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
EFCC1Q9HA90 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
EFCC1Q9HA90 HTR7P1-201ENST00000538670 1336 ntBASIC23.45■■□□□ 1.34
EFCC1Q9HA90 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
EFCC1Q9HA90 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
EFCC1Q9HA90 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms