Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SF3B3-208ENST00000567250 1084 ntTSL 313.97□□□□□ -0.172e-7■■■■□ 23.4
XRN2Q9H0D6 C1RL-208ENST00000543933 592 ntTSL 513.78□□□□□ -0.22e-7■■■■□ 23.4
XRN2Q9H0D6 C1RL-209ENST00000543941 539 ntTSL 313.78□□□□□ -0.22e-7■■■■□ 23.4
XRN2Q9H0D6 RFX1-204ENST00000588885 886 ntTSL 313.74□□□□□ -0.212e-7■■■■□ 23.4
XRN2Q9H0D6 DCUN1D1-203ENST00000466812 461 ntTSL 213.68□□□□□ -0.222e-7■■■■□ 23.4
XRN2Q9H0D6 RNF123-210ENST00000487805 5882 ntTSL 213.64□□□□□ -0.235e-6■■■■□ 23.4
XRN2Q9H0D6 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.232e-7■■■■□ 23.4
XRN2Q9H0D6 ZNF581-201ENST00000270451 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.232e-7■■■■□ 23.4
XRN2Q9H0D6 ZNF581-204ENST00000588537 1100 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.232e-7■■■■□ 23.4
XRN2Q9H0D6 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.242e-7■■■■□ 23.4
XRN2Q9H0D6 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.242e-7■■■■□ 23.4
XRN2Q9H0D6 FAAH-205ENST00000493636 527 ntTSL 313.55□□□□□ -0.242e-7■■■■□ 23.4
XRN2Q9H0D6 DNM2-221ENST00000593203 2507 ntTSL 213.51□□□□□ -0.252e-7■■■■□ 23.4
XRN2Q9H0D6 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.252e-7■■■■□ 23.4
XRN2Q9H0D6 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.272e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-205ENST00000517559 559 ntTSL 413.37□□□□□ -0.272e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.36□□□□□ -0.272e-7■■■■□ 23.4
XRN2Q9H0D6 ALDOA-214ENST00000564688 613 ntTSL 513.31□□□□□ -0.282e-9■■■■□ 23.4
XRN2Q9H0D6 CARM1-207ENST00000589693 601 ntTSL 513.3□□□□□ -0.282e-7■■■■□ 23.4
XRN2Q9H0D6 CLK3-206ENST00000562078 2455 ntTSL 213.28□□□□□ -0.282e-7■■■■□ 23.4
XRN2Q9H0D6 C1RL-204ENST00000534969 532 ntTSL 313.21□□□□□ -0.292e-7■■■■□ 23.4
XRN2Q9H0D6 C1RL-205ENST00000537833 561 ntTSL 313.21□□□□□ -0.292e-7■■■■□ 23.4
XRN2Q9H0D6 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.21□□□□□ -0.293e-7■■■■□ 23.4
XRN2Q9H0D6 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.312e-7■■■■□ 23.4
XRN2Q9H0D6 DCUN1D1-207ENST00000497606 504 ntTSL 213□□□□□ -0.332e-7■■■■□ 23.4
XRN2Q9H0D6 ZCCHC14-204ENST00000568020 6242 ntTSL 1 (best)12.98□□□□□ -0.332e-7■■■■□ 23.4
XRN2Q9H0D6 CTTN-208ENST00000498223 523 ntTSL 312.95□□□□□ -0.343e-7■■■■□ 23.4
XRN2Q9H0D6 USP42-206ENST00000479544 4286 ntTSL 1 (best)12.94□□□□□ -0.342e-7■■■■□ 23.4
XRN2Q9H0D6 MYO15B-233ENST00000612587 4189 ntTSL 512.84□□□□□ -0.353e-7■■■■□ 23.4
XRN2Q9H0D6 ENSA-202ENST00000339643 633 ntTSL 2 BASIC12.68□□□□□ -0.381e-11■■■■□ 23.4
XRN2Q9H0D6 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.392e-7■■■■□ 23.4
XRN2Q9H0D6 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.42e-7■■■■□ 23.4
XRN2Q9H0D6 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.422e-7■■■■□ 23.4
XRN2Q9H0D6 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.432e-7■■■■□ 23.4
XRN2Q9H0D6 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.442e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-206ENST00000518444 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.462e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-211ENST00000523389 588 ntTSL 312.11□□□□□ -0.472e-7■■■■□ 23.4
XRN2Q9H0D6 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.471e-6■■■■□ 23.4
XRN2Q9H0D6 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.472e-7■■■■□ 23.4
XRN2Q9H0D6 RNF123-209ENST00000486102 4564 ntTSL 1 (best)12.06□□□□□ -0.485e-6■■■■□ 23.4
XRN2Q9H0D6 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.52e-7■■■■□ 23.4
XRN2Q9H0D6 DCUN1D1-205ENST00000487822 560 ntTSL 311.89□□□□□ -0.512e-7■■■■□ 23.4
XRN2Q9H0D6 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.542e-7■■■■□ 23.4
XRN2Q9H0D6 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.572e-7■■■■□ 23.4
XRN2Q9H0D6 FLII-222ENST00000579294 3936 ntTSL 1 (best) BASIC11.1□□□□□ -0.635e-6■■■■□ 23.4
XRN2Q9H0D6 ENSA-213ENST00000509582 716 ntTSL 311.03□□□□□ -0.641e-11■■■■□ 23.4
XRN2Q9H0D6 ALDOA-218ENST00000566146 365 ntTSL 1 (best)11□□□□□ -0.652e-7■■■■□ 23.4
XRN2Q9H0D6 FLII-220ENST00000578101 4148 ntTSL 210.99□□□□□ -0.655e-6■■■■□ 23.4
XRN2Q9H0D6 NIT1-207ENST00000477684 499 ntTSL 310.88□□□□□ -0.672e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-204ENST00000429001 4000 ntTSL 5 BASIC10.87□□□□□ -0.672e-7■■■■□ 23.4
XRN2Q9H0D6 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.75e-6■■■■□ 23.4
XRN2Q9H0D6 ENSA-209ENST00000369016 923 ntTSL 5 BASIC10.65□□□□□ -0.71e-11■■■■□ 23.4
XRN2Q9H0D6 RNF123-207ENST00000457726 4506 ntTSL 1 (best)10.4□□□□□ -0.745e-6■■■■□ 23.4
XRN2Q9H0D6 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.752e-7■■■■□ 23.4
XRN2Q9H0D6 CLK3-226ENST00000569406 3591 ntTSL 210.32□□□□□ -0.762e-7■■■■□ 23.4
XRN2Q9H0D6 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.812e-7■■■■□ 23.4
XRN2Q9H0D6 FLII-215ENST00000545457 3975 ntTSL 2 BASIC9.95□□□□□ -0.825e-6■■■■□ 23.4
XRN2Q9H0D6 USP19-204ENST00000398896 3907 ntAPPRIS ALT2 TSL 1 (best)9.85□□□□□ -0.832e-7■■■■□ 23.4
XRN2Q9H0D6 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC9.79□□□□□ -0.842e-7■■■■□ 23.4
XRN2Q9H0D6 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC9.31□□□□□ -0.922e-7■■■■□ 23.4
XRN2Q9H0D6 H2AFY-218ENST00000512507 10982 ntTSL 1 (best)9.25□□□□□ -0.936e-14■■■■□ 23.4
XRN2Q9H0D6 LARP4-218ENST00000552445 722 ntTSL 38.65□□□□□ -1.022e-7■■■■□ 23.4
XRN2Q9H0D6 DCUN1D1-202ENST00000460412 567 ntTSL 38.48□□□□□ -1.052e-7■■■■□ 23.4
XRN2Q9H0D6 DDT-205ENST00000428792 333 ntTSL 28.26□□□□□ -1.092e-7■■■■□ 23.4
XRN2Q9H0D6 SF3B3-209ENST00000567635 630 ntTSL 58.23□□□□□ -1.092e-7■■■■□ 23.4
XRN2Q9H0D6 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.092e-7■■■■□ 23.4
XRN2Q9H0D6 MARCH6-210ENST00000511802 4734 ntTSL 28.22□□□□□ -1.092e-7■■■■□ 23.4
XRN2Q9H0D6 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.14□□□□□ -1.112e-7■■■■□ 23.4
XRN2Q9H0D6 LMO7-224ENST00000533305 720 ntTSL 58.08□□□□□ -1.122e-7■■■■□ 23.4
XRN2Q9H0D6 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.192e-7■■■■□ 23.4
XRN2Q9H0D6 NIT1-206ENST00000473918 223 ntTSL 37.47□□□□□ -1.212e-7■■■■□ 23.4
XRN2Q9H0D6 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.242e-7■■■■□ 23.4
XRN2Q9H0D6 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.262e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-216ENST00000550522 567 ntTSL 46.69□□□□□ -1.342e-7■■■■□ 23.4
XRN2Q9H0D6 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.372e-7■■■■□ 23.4
XRN2Q9H0D6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.42e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.42e-7■■■■□ 23.4
XRN2Q9H0D6 CCDC144NL-AS1-201ENST00000417232 709 ntTSL 36.03□□□□□ -1.441e-6■■■■□ 23.4
XRN2Q9H0D6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.45□□□□□ -1.542e-7■■■■□ 23.4
XRN2Q9H0D6 DCUN1D1-206ENST00000492563 659 ntTSL 55.28□□□□□ -1.562e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.08□□□□□ -1.62e-7■■■■□ 23.4
XRN2Q9H0D6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.62□□□□□ -1.672e-7■■■■□ 23.4
XRN2Q9H0D6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.71□□□□□ -1.822e-7■■■■□ 23.4
XRN2Q9H0D6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.892e-7■■■■□ 23.4
XRN2Q9H0D6 LARP4-215ENST00000550260 583 ntTSL 33.18□□□□□ -1.92e-7■■■■□ 23.4
XRN2Q9H0D6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.89■□□□□ 0.132e-7■■■■□ 23.4
XRN2Q9H0D6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.012e-7■■■■□ 23.4
XRN2Q9H0D6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.212e-7■■■■□ 23.4
XRN2Q9H0D6 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.382e-7■■■■□ 23.4
XRN2Q9H0D6 ALDOA-224ENST00000568435 935 ntTSL 1 (best)19.79■□□□□ 0.761e-6■■■■□ 23.4
XRN2Q9H0D6 EIF4A2-215ENST00000467585 570 ntTSL 215.09■□□□□ 0.012e-12■■■■□ 23.4
XRN2Q9H0D6 EIF4A2-227ENST00000498746 579 ntTSL 214.12□□□□□ -0.152e-12■■■■□ 23.4
XRN2Q9H0D6 PKD1P6-201ENST00000343738 4769 ntBASIC21.08■□□□□ 0.974e-7■■■■□ 23.4
XRN2Q9H0D6 KMT5B-210ENST00000453170 594 ntTSL 529.84■■■□□ 2.376e-7■■■■□ 23.4
XRN2Q9H0D6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.94■□□□□ 0.786e-7■■■■□ 23.4
XRN2Q9H0D6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.826e-7■■■■□ 23.3
XRN2Q9H0D6 LCN12-205ENST00000470501 1804 ntTSL 219.64■□□□□ 0.734e-8■■■■□ 23.3
XRN2Q9H0D6 LCN12-213ENST00000494713 524 ntTSL 218.89■□□□□ 0.614e-8■■■■□ 23.3
XRN2Q9H0D6 LCN12-206ENST00000471615 489 ntTSL 518.44■□□□□ 0.544e-8■■■■□ 23.3
XRN2Q9H0D6 LCN12-210ENST00000491316 629 ntTSL 318.44■□□□□ 0.544e-8■■■■□ 23.3
Retrieved 100 of 21,068 protein–RNA pairs in 149.2 ms