Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 C2orf69P4-201ENST00000565394 541 ntBASIC16.13■□□□□ 0.17
RNF5Q99942 AC105036.2-201ENST00000569468 176 ntBASIC16.13■□□□□ 0.17
RNF5Q99942 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF5Q99942 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF5Q99942 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF5Q99942 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF5Q99942 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF5Q99942 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF5Q99942 MKRN4P-201ENST00000444706 1521 ntBASIC16.13■□□□□ 0.17
RNF5Q99942 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF5Q99942 SMG8-203ENST00000578922 2178 ntBASIC16.13■□□□□ 0.17
RNF5Q99942 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF5Q99942 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RNF5Q99942 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF5Q99942 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF5Q99942 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF5Q99942 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 AL355472.2-201ENST00000422958 438 ntBASIC16.12■□□□□ 0.17
RNF5Q99942 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF5Q99942 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF5Q99942 AC023632.3-201ENST00000521633 145 ntBASIC16.12■□□□□ 0.17
RNF5Q99942 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 AL121832.2-201ENST00000610979 668 ntBASIC16.12■□□□□ 0.17
RNF5Q99942 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF5Q99942 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF5Q99942 AC099778.1-201ENST00000568593 1911 ntBASIC16.11■□□□□ 0.17
RNF5Q99942 KRT8P20-201ENST00000423953 1409 ntBASIC16.11■□□□□ 0.17
RNF5Q99942 KRT8P17-201ENST00000453110 1448 ntBASIC16.11■□□□□ 0.17
RNF5Q99942 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RNF5Q99942 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF5Q99942 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF5Q99942 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF5Q99942 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF5Q99942 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF5Q99942 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RNF5Q99942 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF5Q99942 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF5Q99942 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF5Q99942 AL031963.3-201ENST00000606441 850 ntBASIC16.11■□□□□ 0.17
RNF5Q99942 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF5Q99942 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF5Q99942 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF5Q99942 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF5Q99942 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF5Q99942 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF5Q99942 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF5Q99942 BX119927.1-201ENST00000636596 1552 ntBASIC16.1■□□□□ 0.17
RNF5Q99942 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RNF5Q99942 MIR663A-201ENST00000385250 93 ntBASIC16.1■□□□□ 0.17
RNF5Q99942 CROCCP5-201ENST00000436658 830 ntBASIC16.1■□□□□ 0.17
RNF5Q99942 AC006970.2-201ENST00000450065 779 ntBASIC16.1■□□□□ 0.17
RNF5Q99942 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF5Q99942 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF5Q99942 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF5Q99942 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF5Q99942 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF5Q99942 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 KRT16P6-202ENST00000425692 1426 ntBASIC16.1■□□□□ 0.17
RNF5Q99942 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF5Q99942 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF5Q99942 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF5Q99942 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF5Q99942 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF5Q99942 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
RNF5Q99942 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF5Q99942 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF5Q99942 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF5Q99942 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF5Q99942 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF5Q99942 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF5Q99942 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF5Q99942 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms