Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 TREX1-205ENST00000625293 1783 ntBASIC18.98■□□□□ 0.63
NR1H4Q96RI1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.98■□□□□ 0.63
NR1H4Q96RI1 AC120498.9-201ENST00000339021 3867 ntBASIC18.98■□□□□ 0.63
NR1H4Q96RI1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 AC137630.3-201ENST00000607245 391 ntBASIC18.97■□□□□ 0.63
NR1H4Q96RI1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NR1H4Q96RI1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 LINC01465-201ENST00000408887 1940 ntBASIC18.96■□□□□ 0.63
NR1H4Q96RI1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H4Q96RI1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 AC005703.6-201ENST00000623265 1329 ntBASIC18.95■□□□□ 0.62
NR1H4Q96RI1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
NR1H4Q96RI1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms