Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 AC027612.3-201ENST00000413684 1047 ntBASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTRT1Q8TDG2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 AC105265.2-201ENST00000467189 838 ntBASIC21■□□□□ 0.95
ACTRT1Q8TDG2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACTRT1Q8TDG2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 SLC7A5P1-201ENST00000568957 537 ntBASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTRT1Q8TDG2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTRT1Q8TDG2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 LINC02228-203ENST00000641970 1355 ntBASIC20.97■□□□□ 0.95
ACTRT1Q8TDG2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTRT1Q8TDG2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACTRT1Q8TDG2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
ACTRT1Q8TDG2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ACTRT1Q8TDG2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms