Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFI1BQ5VTD9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFI1BQ5VTD9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GFI1BQ5VTD9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFI1BQ5VTD9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GFI1BQ5VTD9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFI1BQ5VTD9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
GFI1BQ5VTD9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 AL512408.1-201ENST00000569378 2000 ntBASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 AC096631.2-201ENST00000436136 790 ntBASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 AC126544.1-201ENST00000580842 1059 ntBASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 AL162377.1-201ENST00000618844 1793 ntBASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFI1BQ5VTD9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.71■□□□□ 0.11
GFI1BQ5VTD9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFI1BQ5VTD9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GFI1BQ5VTD9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFI1BQ5VTD9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFI1BQ5VTD9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.71■□□□□ 0.1
GFI1BQ5VTD9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
GFI1BQ5VTD9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 AC020763.4-201ENST00000623414 4170 ntBASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFI1BQ5VTD9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms