Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC153Q494R4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC153Q494R4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC153Q494R4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC153Q494R4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC153Q494R4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC153Q494R4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC153Q494R4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC153Q494R4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC153Q494R4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC153Q494R4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC153Q494R4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC153Q494R4 AC087289.5-201ENST00000586076 3175 ntBASIC19.91■□□□□ 0.78
CCDC153Q494R4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC153Q494R4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 AC123595.1-201ENST00000440769 1046 ntBASIC19.9■□□□□ 0.78
CCDC153Q494R4 CDV3P1-201ENST00000471403 739 ntBASIC19.9■□□□□ 0.78
CCDC153Q494R4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC153Q494R4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC153Q494R4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC153Q494R4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC153Q494R4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC153Q494R4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC153Q494R4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC153Q494R4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC153Q494R4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC153Q494R4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC153Q494R4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC153Q494R4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC153Q494R4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC153Q494R4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC153Q494R4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.89■□□□□ 0.77
CCDC153Q494R4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC153Q494R4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC153Q494R4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC153Q494R4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC153Q494R4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC153Q494R4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC153Q494R4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC153Q494R4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms