Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 PDE2YOR360C 1581 nt2.34□□□□□ -2.03
CTK1Q03957 AI5_ALPHAQ0070 1893 nt2.34□□□□□ -2.03
CTK1Q03957 MMS22YLR320W 4365 nt2.34□□□□□ -2.04
CTK1Q03957 MPT5YGL178W 2580 nt2.33□□□□□ -2.04
CTK1Q03957 ACM1YPL267W 630 nt2.33□□□□□ -2.04
CTK1Q03957 PHO91YNR013C 2685 nt2.33□□□□□ -2.04
CTK1Q03957 SPT21YMR179W 2277 nt2.33□□□□□ -2.04
CTK1Q03957 COS111YBR203W 2775 nt2.32□□□□□ -2.04
CTK1Q03957 VTC3YPL019C 2508 nt2.32□□□□□ -2.04
CTK1Q03957 TRA1YHR099W 11235 nt2.32□□□□□ -2.04
CTK1Q03957 HYP2YEL034W 474 nt2.32□□□□□ -2.04
CTK1Q03957 YNL018CYNL018C 1839 nt2.32□□□□□ -2.04
CTK1Q03957 SWI6YLR182W 2412 nt2.32□□□□□ -2.04
CTK1Q03957 SLM1YIL105C 2061 nt2.32□□□□□ -2.04
CTK1Q03957 MSB1YOR188W 3414 nt2.32□□□□□ -2.04
CTK1Q03957 BNR1YIL159W 4128 nt2.32□□□□□ -2.04
CTK1Q03957 SPF1YEL031W 3648 nt2.31□□□□□ -2.04
CTK1Q03957 RFX1YLR176C 2436 nt2.31□□□□□ -2.04
CTK1Q03957 VPS54YDR027C 2670 nt2.31□□□□□ -2.04
CTK1Q03957 YCR043CYCR043C 384 nt2.31□□□□□ -2.04
CTK1Q03957 snR72snR72 98 nt2.31□□□□□ -2.04
CTK1Q03957 YJL150WYJL150W 303 nt2.31□□□□□ -2.04
CTK1Q03957 PSD2YGR170W 3417 nt2.3□□□□□ -2.04
CTK1Q03957 VPS55YJR044C 423 nt2.3□□□□□ -2.04
CTK1Q03957 PAU8YAL068C 363 nt2.3□□□□□ -2.04
CTK1Q03957 PAU18YLL064C 363 nt2.3□□□□□ -2.04
CTK1Q03957 PAU6YNR076W 363 nt2.3□□□□□ -2.04
CTK1Q03957 PAU20YOL161C 363 nt2.3□□□□□ -2.04
CTK1Q03957 STE11YLR362W 2154 nt2.3□□□□□ -2.04
CTK1Q03957 ZRG8YER033C 3231 nt2.3□□□□□ -2.04
CTK1Q03957 SCP160YJL080C 3669 nt2.3□□□□□ -2.04
CTK1Q03957 VPS13YLL040C 9435 nt2.29□□□□□ -2.04
CTK1Q03957 SWI5YDR146C 2130 nt2.29□□□□□ -2.04
CTK1Q03957 YER088C-AYER088C-A 324 nt2.29□□□□□ -2.04
CTK1Q03957 RRT15YLR162W-A 189 nt2.29□□□□□ -2.04
CTK1Q03957 YBL008W-AYBL008W-A 240 nt2.29□□□□□ -2.04
CTK1Q03957 LYS14YDR034C 2373 nt2.29□□□□□ -2.04
CTK1Q03957 MLH1YMR167W 2310 nt2.29□□□□□ -2.04
CTK1Q03957 ISW1YBR245C 3390 nt2.29□□□□□ -2.04
CTK1Q03957 TOP2YNL088W 4287 nt2.28□□□□□ -2.04
CTK1Q03957 NIP100YPL174C 2607 nt2.28□□□□□ -2.04
CTK1Q03957 SVL3YPL032C 2478 nt2.28□□□□□ -2.04
CTK1Q03957 YHR073W-AYHR073W-A 177 nt2.28□□□□□ -2.04
CTK1Q03957 SGM1YJR134C 2124 nt2.28□□□□□ -2.04
CTK1Q03957 YNL338WYNL338W 159 nt2.28□□□□□ -2.04
CTK1Q03957 RPB10YOR210W 213 nt2.28□□□□□ -2.04
CTK1Q03957 KTI11YBL071W-A 249 nt2.27□□□□□ -2.05
CTK1Q03957 YPR092WYPR092W 306 nt2.27□□□□□ -2.05
CTK1Q03957 PDR11YIL013C 4236 nt2.27□□□□□ -2.05
CTK1Q03957 MET18YIL128W 3099 nt2.26□□□□□ -2.05
CTK1Q03957 OLI1Q0130 231 nt2.26□□□□□ -2.05
CTK1Q03957 YCL046WYCL046W 324 nt2.26□□□□□ -2.05
CTK1Q03957 SGS1YMR190C 4344 nt2.26□□□□□ -2.05
CTK1Q03957 UBR1YGR184C 5853 nt2.26□□□□□ -2.05
CTK1Q03957 SPC98YNL126W 2541 nt2.25□□□□□ -2.05
CTK1Q03957 APL5YPL195W 2799 nt2.25□□□□□ -2.05
CTK1Q03957 snR74snR74 88 nt2.25□□□□□ -2.05
CTK1Q03957 SLY1YDR189W 2001 nt2.25□□□□□ -2.05
CTK1Q03957 TRS130YMR218C 3309 nt2.25□□□□□ -2.05
CTK1Q03957 TRS65YGR166W 1683 nt2.25□□□□□ -2.05
CTK1Q03957 ORC2YBR060C 1863 nt2.24□□□□□ -2.05
CTK1Q03957 YDL007C-AYDL007C-A 258 nt2.24□□□□□ -2.05
CTK1Q03957 YHR071C-AYHR071C-A 321 nt2.24□□□□□ -2.05
CTK1Q03957 YLR140WYLR140W 327 nt2.24□□□□□ -2.05
CTK1Q03957 YNL097C-BYNL097C-B 123 nt2.24□□□□□ -2.05
CTK1Q03957 ATG11YPR049C 3537 nt2.24□□□□□ -2.05
CTK1Q03957 MNE1YOR350C 1992 nt2.23□□□□□ -2.05
CTK1Q03957 VPS8YAL002W 3825 nt2.23□□□□□ -2.05
CTK1Q03957 SMC6YLR383W 3345 nt2.23□□□□□ -2.05
CTK1Q03957 FAR11YNL127W 2862 nt2.23□□□□□ -2.05
CTK1Q03957 PRP39YML046W 1890 nt2.23□□□□□ -2.05
CTK1Q03957 PHO2YDL106C 1680 nt2.23□□□□□ -2.05
CTK1Q03957 YEL014CYEL014C 306 nt2.23□□□□□ -2.05
CTK1Q03957 EMP24YGL200C 612 nt2.23□□□□□ -2.05
CTK1Q03957 YLR342W-AYLR342W-A 174 nt2.23□□□□□ -2.05
CTK1Q03957 RPS29AYLR388W 171 nt2.23□□□□□ -2.05
CTK1Q03957 SWA2YDR320C 2007 nt2.23□□□□□ -2.05
CTK1Q03957 SEC5YDR166C 2916 nt2.22□□□□□ -2.05
CTK1Q03957 ATP8Q0080 147 nt2.22□□□□□ -2.05
CTK1Q03957 YIR030W-AYIR030W-A 384 nt2.22□□□□□ -2.05
CTK1Q03957 YLR154W-AYLR154W-A 186 nt2.22□□□□□ -2.05
CTK1Q03957 YOR376WYOR376W 369 nt2.22□□□□□ -2.05
CTK1Q03957 YBR182C-AYBR182C-A 195 nt2.22□□□□□ -2.05
CTK1Q03957 SPO75YLL005C 2607 nt2.22□□□□□ -2.05
CTK1Q03957 YOL098CYOL098C 3114 nt2.22□□□□□ -2.05
CTK1Q03957 TOR1YJR066W 7413 nt2.22□□□□□ -2.05
CTK1Q03957 SIR3YLR442C 2937 nt2.21□□□□□ -2.05
CTK1Q03957 NUP100YKL068W 2880 nt2.21□□□□□ -2.06
CTK1Q03957 YDR003W-AYDR003W-A 123 nt2.21□□□□□ -2.06
CTK1Q03957 VTC1YER072W 390 nt2.21□□□□□ -2.06
CTK1Q03957 UBP15YMR304W 3693 nt2.21□□□□□ -2.06
CTK1Q03957 SGF11YPL047W 300 nt2.21□□□□□ -2.06
CTK1Q03957 YEF3YLR249W 3135 nt2.21□□□□□ -2.06
CTK1Q03957 YKU70YMR284W 1809 nt2.2□□□□□ -2.06
CTK1Q03957 CLN3YAL040C 1743 nt2.2□□□□□ -2.06
CTK1Q03957 ZRG17YNR039C 1818 nt2.19□□□□□ -2.06
CTK1Q03957 RPS27BYHR021C 249 nt2.19□□□□□ -2.06
CTK1Q03957 RPS17AYML024W 411 nt2.19□□□□□ -2.06
CTK1Q03957 SCD5YOR329C 2619 nt2.18□□□□□ -2.06
CTK1Q03957 YRB1YDR002W 606 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms