Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.9■■□□□ 1.74
KCNQ4P56696 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.9■■□□□ 1.74
KCNQ4P56696 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
KCNQ4P56696 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
KCNQ4P56696 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.9■■□□□ 1.74
KCNQ4P56696 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.9■■□□□ 1.74
KCNQ4P56696 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KCNQ4P56696 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.9■■□□□ 1.74
KCNQ4P56696 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ4P56696 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ4P56696 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ4P56696 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ4P56696 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.89■■□□□ 1.74
KCNQ4P56696 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ4P56696 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.89■■□□□ 1.74
KCNQ4P56696 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
KCNQ4P56696 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
KCNQ4P56696 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ4P56696 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
KCNQ4P56696 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
KCNQ4P56696 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
KCNQ4P56696 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
KCNQ4P56696 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
KCNQ4P56696 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
KCNQ4P56696 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ4P56696 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
KCNQ4P56696 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ4P56696 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ4P56696 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
KCNQ4P56696 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ4P56696 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.88■■□□□ 1.73
KCNQ4P56696 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.88■■□□□ 1.73
KCNQ4P56696 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.88■■□□□ 1.73
KCNQ4P56696 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ4P56696 AC023632.3-201ENST00000521633 145 ntBASIC25.88■■□□□ 1.73
KCNQ4P56696 AC004264.1-201ENST00000608354 794 ntBASIC25.88■■□□□ 1.73
KCNQ4P56696 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.88■■□□□ 1.73
KCNQ4P56696 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ4P56696 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ4P56696 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
KCNQ4P56696 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ4P56696 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ4P56696 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ4P56696 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ4P56696 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ4P56696 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ4P56696 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ4P56696 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
KCNQ4P56696 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.87■■□□□ 1.73
KCNQ4P56696 ECEL1P2-202ENST00000465689 757 ntBASIC25.87■■□□□ 1.73
KCNQ4P56696 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
KCNQ4P56696 AL121906.2-201ENST00000621597 723 ntBASIC25.87■■□□□ 1.73
KCNQ4P56696 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.87■■□□□ 1.73
KCNQ4P56696 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ4P56696 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.87■■□□□ 1.73
KCNQ4P56696 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.86■■□□□ 1.73
KCNQ4P56696 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.86■■□□□ 1.73
KCNQ4P56696 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.86■■□□□ 1.73
KCNQ4P56696 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ4P56696 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.86■■□□□ 1.73
KCNQ4P56696 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
KCNQ4P56696 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.86■■□□□ 1.73
KCNQ4P56696 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ4P56696 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
KCNQ4P56696 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.86■■□□□ 1.73
KCNQ4P56696 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.86■■□□□ 1.73
KCNQ4P56696 AL358472.4-201ENST00000633140 710 ntBASIC25.86■■□□□ 1.73
KCNQ4P56696 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ4P56696 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ4P56696 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
KCNQ4P56696 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ4P56696 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ4P56696 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ4P56696 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ4P56696 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ4P56696 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ4P56696 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.85■■□□□ 1.73
KCNQ4P56696 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ4P56696 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.85■■□□□ 1.73
KCNQ4P56696 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ4P56696 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ4P56696 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.85■■□□□ 1.73
KCNQ4P56696 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.85■■□□□ 1.73
KCNQ4P56696 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ4P56696 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.85■■□□□ 1.73
KCNQ4P56696 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ4P56696 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ4P56696 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ4P56696 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ4P56696 INGX-201ENST00000359239 846 ntBASIC25.84■■□□□ 1.73
KCNQ4P56696 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ4P56696 NIFKP9-201ENST00000419265 221 ntBASIC25.84■■□□□ 1.73
KCNQ4P56696 UPK3BP1-201ENST00000428678 509 ntBASIC25.84■■□□□ 1.73
KCNQ4P56696 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.84■■□□□ 1.73
KCNQ4P56696 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ4P56696 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
KCNQ4P56696 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.84■■□□□ 1.73
KCNQ4P56696 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ4P56696 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ4P56696 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms