Protein–RNA interactions for Protein: P33121

ACSL1, Long-chain-fatty-acid--CoA ligase 1, humanhuman

Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL1P33121 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.18■□□□□ 0.82
ACSL1P33121 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ACSL1P33121 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.18■□□□□ 0.82
ACSL1P33121 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.18■□□□□ 0.82
ACSL1P33121 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.18■□□□□ 0.82
ACSL1P33121 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 AL049637.2-201ENST00000641778 930 ntBASIC20.18■□□□□ 0.82
ACSL1P33121 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ACSL1P33121 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.18■□□□□ 0.82
ACSL1P33121 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL1P33121 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.17■□□□□ 0.82
ACSL1P33121 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.17■□□□□ 0.82
ACSL1P33121 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL1P33121 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL1P33121 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL1P33121 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ACSL1P33121 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ACSL1P33121 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL1P33121 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL1P33121 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.17■□□□□ 0.82
ACSL1P33121 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL1P33121 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ACSL1P33121 REXO1L12P-201ENST00000622156 912 ntBASIC20.17■□□□□ 0.82
ACSL1P33121 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ACSL1P33121 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL1P33121 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ACSL1P33121 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ACSL1P33121 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL1P33121 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.17■□□□□ 0.82
ACSL1P33121 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.17■□□□□ 0.82
ACSL1P33121 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.17■□□□□ 0.82
ACSL1P33121 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL1P33121 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL1P33121 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL1P33121 AL049796.1-201ENST00000565336 1766 ntBASIC20.16■□□□□ 0.82
ACSL1P33121 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL1P33121 ECEL1P3-201ENST00000427961 737 ntBASIC20.16■□□□□ 0.82
ACSL1P33121 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
ACSL1P33121 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.16■□□□□ 0.82
ACSL1P33121 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
ACSL1P33121 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.16■□□□□ 0.82
ACSL1P33121 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.16■□□□□ 0.82
ACSL1P33121 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL1P33121 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL1P33121 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.16■□□□□ 0.82
ACSL1P33121 AC124283.5-201ENST00000624661 1809 ntBASIC20.16■□□□□ 0.82
ACSL1P33121 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACSL1P33121 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACSL1P33121 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ACSL1P33121 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ACSL1P33121 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.15■□□□□ 0.82
ACSL1P33121 AC023632.3-201ENST00000521633 145 ntBASIC20.15■□□□□ 0.82
ACSL1P33121 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.15■□□□□ 0.82
ACSL1P33121 PRKY-204ENST00000533551 1019 ntBASIC20.15■□□□□ 0.82
ACSL1P33121 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.15■□□□□ 0.82
ACSL1P33121 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACSL1P33121 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACSL1P33121 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.15■□□□□ 0.82
ACSL1P33121 AC121338.2-201ENST00000622535 1744 ntBASIC20.15■□□□□ 0.82
ACSL1P33121 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACSL1P33121 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
ACSL1P33121 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACSL1P33121 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.15■□□□□ 0.82
ACSL1P33121 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACSL1P33121 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ACSL1P33121 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ACSL1P33121 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ACSL1P33121 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.14■□□□□ 0.81
ACSL1P33121 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.14■□□□□ 0.81
ACSL1P33121 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
ACSL1P33121 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 AL135905.2-201ENST00000584934 1404 ntBASIC20.14■□□□□ 0.81
ACSL1P33121 KRT17P2-201ENST00000300992 1314 ntBASIC20.14■□□□□ 0.81
ACSL1P33121 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACSL1P33121 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.14■□□□□ 0.81
ACSL1P33121 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.14■□□□□ 0.81
ACSL1P33121 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ACSL1P33121 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ACSL1P33121 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.14■□□□□ 0.81
ACSL1P33121 AP001412.1-201ENST00000608405 714 ntBASIC20.14■□□□□ 0.81
ACSL1P33121 AC113410.3-201ENST00000623366 203 ntBASIC20.14■□□□□ 0.81
ACSL1P33121 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms