Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0CP27449 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP6V0CP27449 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP6V0CP27449 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP6V0CP27449 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 SMUG1P1-201ENST00000590640 811 ntBASIC16.1■□□□□ 0.17
ATP6V0CP27449 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 MIR6724-1-201ENST00000616420 92 ntBASIC16.1■□□□□ 0.17
ATP6V0CP27449 MIR6724-2-201ENST00000616483 92 ntBASIC16.1■□□□□ 0.17
ATP6V0CP27449 MIR6724-4-201ENST00000617390 92 ntBASIC16.1■□□□□ 0.17
ATP6V0CP27449 MIR6724-3-201ENST00000622482 92 ntBASIC16.1■□□□□ 0.17
ATP6V0CP27449 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0CP27449 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP6V0CP27449 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.09■□□□□ 0.17
ATP6V0CP27449 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0CP27449 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0CP27449 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
ATP6V0CP27449 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.08■□□□□ 0.17
ATP6V0CP27449 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
ATP6V0CP27449 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0CP27449 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0CP27449 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0CP27449 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP6V0CP27449 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP6V0CP27449 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
ATP6V0CP27449 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP6V0CP27449 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.08■□□□□ 0.16
ATP6V0CP27449 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP6V0CP27449 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP6V0CP27449 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP6V0CP27449 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ATP6V0CP27449 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ATP6V0CP27449 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms