Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MSR1P21757 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSR1P21757 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.82■□□□□ 0.44
MSR1P21757 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSR1P21757 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSR1P21757 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSR1P21757 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSR1P21757 AC004911.1-201ENST00000416316 871 ntBASIC17.82■□□□□ 0.44
MSR1P21757 AC005181.1-201ENST00000604782 1256 ntBASIC17.82■□□□□ 0.44
MSR1P21757 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.82■□□□□ 0.44
MSR1P21757 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.82■□□□□ 0.44
MSR1P21757 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.82■□□□□ 0.44
MSR1P21757 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSR1P21757 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MSR1P21757 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.82■□□□□ 0.44
MSR1P21757 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSR1P21757 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.81■□□□□ 0.44
MSR1P21757 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSR1P21757 DPP3P2-201ENST00000416030 1696 ntBASIC17.81■□□□□ 0.44
MSR1P21757 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSR1P21757 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSR1P21757 AC073111.5-205ENST00000641717 521 ntBASIC17.81■□□□□ 0.44
MSR1P21757 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
MSR1P21757 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSR1P21757 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSR1P21757 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.81■□□□□ 0.44
MSR1P21757 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.81■□□□□ 0.44
MSR1P21757 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.81■□□□□ 0.44
MSR1P21757 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.81■□□□□ 0.44
MSR1P21757 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 SMG8-203ENST00000578922 2178 ntBASIC17.8■□□□□ 0.44
MSR1P21757 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.8■□□□□ 0.44
MSR1P21757 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.8■□□□□ 0.44
MSR1P21757 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.8■□□□□ 0.44
MSR1P21757 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.8■□□□□ 0.44
MSR1P21757 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.8■□□□□ 0.44
MSR1P21757 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSR1P21757 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
MSR1P21757 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.8■□□□□ 0.44
MSR1P21757 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
MSR1P21757 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MSR1P21757 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.79■□□□□ 0.44
MSR1P21757 KRT18P68-201ENST00000392293 1000 ntBASIC17.79■□□□□ 0.44
MSR1P21757 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.79■□□□□ 0.44
MSR1P21757 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.79■□□□□ 0.44
MSR1P21757 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
MSR1P21757 AC105020.6-201ENST00000621523 1217 ntBASIC17.79■□□□□ 0.44
MSR1P21757 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.79■□□□□ 0.44
MSR1P21757 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.79■□□□□ 0.44
MSR1P21757 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MSR1P21757 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.79■□□□□ 0.44
MSR1P21757 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MSR1P21757 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSR1P21757 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSR1P21757 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MSR1P21757 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSR1P21757 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.78■□□□□ 0.44
MSR1P21757 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSR1P21757 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSR1P21757 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.78■□□□□ 0.44
MSR1P21757 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MSR1P21757 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.78■□□□□ 0.44
MSR1P21757 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms