Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.91■■□□□ 1.58
COL11A2P13942 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.91■■□□□ 1.58
COL11A2P13942 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL11A2P13942 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL11A2P13942 KSR1P1-201ENST00000446298 240 ntBASIC24.91■■□□□ 1.58
COL11A2P13942 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL11A2P13942 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL11A2P13942 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
COL11A2P13942 AC010203.1-204ENST00000548782 407 ntBASIC24.91■■□□□ 1.58
COL11A2P13942 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.91■■□□□ 1.58
COL11A2P13942 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
COL11A2P13942 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
COL11A2P13942 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.9■■□□□ 1.58
COL11A2P13942 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.9■■□□□ 1.58
COL11A2P13942 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.9■■□□□ 1.58
COL11A2P13942 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
COL11A2P13942 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.9■■□□□ 1.58
COL11A2P13942 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.9■■□□□ 1.58
COL11A2P13942 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL11A2P13942 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.89■■□□□ 1.58
COL11A2P13942 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
COL11A2P13942 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.89■■□□□ 1.58
COL11A2P13942 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
COL11A2P13942 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL11A2P13942 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
COL11A2P13942 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL11A2P13942 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL11A2P13942 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL11A2P13942 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.89■■□□□ 1.57
COL11A2P13942 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.89■■□□□ 1.57
COL11A2P13942 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL11A2P13942 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
COL11A2P13942 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL11A2P13942 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL11A2P13942 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL11A2P13942 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL11A2P13942 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL11A2P13942 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL11A2P13942 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL11A2P13942 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.88■■□□□ 1.57
COL11A2P13942 KRT18P22-201ENST00000402024 1347 ntBASIC24.88■■□□□ 1.57
COL11A2P13942 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
COL11A2P13942 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.88■■□□□ 1.57
COL11A2P13942 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL11A2P13942 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.88■■□□□ 1.57
COL11A2P13942 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.88■■□□□ 1.57
COL11A2P13942 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
COL11A2P13942 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
COL11A2P13942 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL11A2P13942 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL11A2P13942 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL11A2P13942 MESTP1-201ENST00000404287 994 ntBASIC24.87■■□□□ 1.57
COL11A2P13942 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.87■■□□□ 1.57
COL11A2P13942 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL11A2P13942 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL11A2P13942 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL11A2P13942 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL11A2P13942 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.86■■□□□ 1.57
COL11A2P13942 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
COL11A2P13942 AC022616.7-201ENST00000525383 220 ntBASIC24.86■■□□□ 1.57
COL11A2P13942 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.86■■□□□ 1.57
COL11A2P13942 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.86■■□□□ 1.57
COL11A2P13942 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
COL11A2P13942 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.86■■□□□ 1.57
COL11A2P13942 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
COL11A2P13942 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
COL11A2P13942 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.86■■□□□ 1.57
COL11A2P13942 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.86■■□□□ 1.57
COL11A2P13942 AC026271.3-201ENST00000571884 352 ntBASIC24.86■■□□□ 1.57
COL11A2P13942 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL11A2P13942 AC011484.1-201ENST00000377652 1995 ntBASIC24.86■■□□□ 1.57
COL11A2P13942 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL11A2P13942 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.85■■□□□ 1.57
COL11A2P13942 AC027702.1-201ENST00000563810 1770 ntBASIC24.85■■□□□ 1.57
COL11A2P13942 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
COL11A2P13942 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL11A2P13942 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL11A2P13942 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.85■■□□□ 1.57
COL11A2P13942 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.85■■□□□ 1.57
COL11A2P13942 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms