Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 AC092720.2-201ENST00000602388 1665 ntBASIC19.81■□□□□ 0.76
CAPN1P07384 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN1P07384 AC069152.1-201ENST00000438030 544 ntBASIC19.81■□□□□ 0.76
CAPN1P07384 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.81■□□□□ 0.76
CAPN1P07384 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 AC098934.4-201ENST00000564127 592 ntBASIC19.81■□□□□ 0.76
CAPN1P07384 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN1P07384 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.81■□□□□ 0.76
CAPN1P07384 RBM17P2-201ENST00000616397 1405 ntBASIC19.81■□□□□ 0.76
CAPN1P07384 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.81■□□□□ 0.76
CAPN1P07384 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN1P07384 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CAPN1P07384 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN1P07384 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.81■□□□□ 0.76
CAPN1P07384 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CAPN1P07384 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CAPN1P07384 AC112907.3-201ENST00000577781 2400 ntBASIC19.81■□□□□ 0.76
CAPN1P07384 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CAPN1P07384 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CAPN1P07384 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CAPN1P07384 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN1P07384 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN1P07384 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CAPN1P07384 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN1P07384 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN1P07384 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.8■□□□□ 0.76
CAPN1P07384 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN1P07384 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.8■□□□□ 0.76
CAPN1P07384 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN1P07384 KRT18P6-201ENST00000555540 1265 ntBASIC19.8■□□□□ 0.76
CAPN1P07384 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.8■□□□□ 0.76
CAPN1P07384 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CAPN1P07384 OR10C1-204ENST00000622521 1039 ntBASIC19.8■□□□□ 0.76
CAPN1P07384 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.8■□□□□ 0.76
CAPN1P07384 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN1P07384 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN1P07384 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN1P07384 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CAPN1P07384 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN1P07384 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN1P07384 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPN1P07384 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN1P07384 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CAPN1P07384 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPN1P07384 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN1P07384 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPN1P07384 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CAPN1P07384 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CAPN1P07384 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN1P07384 CD99P1-205ENST00000527459 561 ntBASIC19.79■□□□□ 0.76
CAPN1P07384 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN1P07384 MIR2861-201ENST00000636310 90 ntBASIC19.79■□□□□ 0.76
CAPN1P07384 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN1P07384 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN1P07384 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CAPN1P07384 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN1P07384 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CAPN1P07384 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN1P07384 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN1P07384 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN1P07384 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN1P07384 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CAPN1P07384 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN1P07384 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN1P07384 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CAPN1P07384 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CAPN1P07384 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 AC093787.1-201ENST00000450396 207 ntBASIC19.78■□□□□ 0.76
CAPN1P07384 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.78■□□□□ 0.76
CAPN1P07384 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.78■□□□□ 0.76
CAPN1P07384 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN1P07384 AC243732.1-201ENST00000612648 864 ntBASIC19.78■□□□□ 0.76
CAPN1P07384 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN1P07384 AC133041.1-202ENST00000642053 222 ntBASIC19.78■□□□□ 0.76
CAPN1P07384 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CAPN1P07384 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN1P07384 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CAPN1P07384 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms