Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX6O95503 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CBX6O95503 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBX6O95503 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX6O95503 CDCA4P2-201ENST00000441182 718 ntBASIC20.04■□□□□ 0.8
CBX6O95503 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.04■□□□□ 0.8
CBX6O95503 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.04■□□□□ 0.8
CBX6O95503 AC105233.4-201ENST00000642045 216 ntBASIC20.04■□□□□ 0.8
CBX6O95503 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CBX6O95503 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX6O95503 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.04■□□□□ 0.8
CBX6O95503 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CBX6O95503 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX6O95503 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBX6O95503 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBX6O95503 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.04■□□□□ 0.8
CBX6O95503 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.03■□□□□ 0.8
CBX6O95503 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CBX6O95503 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CBX6O95503 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.03■□□□□ 0.8
CBX6O95503 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CBX6O95503 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.03■□□□□ 0.8
CBX6O95503 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CBX6O95503 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CBX6O95503 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CBX6O95503 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.03■□□□□ 0.8
CBX6O95503 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.03■□□□□ 0.8
CBX6O95503 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.03■□□□□ 0.8
CBX6O95503 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CBX6O95503 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CBX6O95503 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CBX6O95503 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CBX6O95503 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.02■□□□□ 0.8
CBX6O95503 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX6O95503 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX6O95503 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX6O95503 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.02■□□□□ 0.8
CBX6O95503 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CBX6O95503 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX6O95503 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.02■□□□□ 0.8
CBX6O95503 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CBX6O95503 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX6O95503 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.02■□□□□ 0.8
CBX6O95503 AC016769.1-201ENST00000409132 1010 ntBASIC20.02■□□□□ 0.8
CBX6O95503 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.02■□□□□ 0.8
CBX6O95503 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.02■□□□□ 0.8
CBX6O95503 KRT18P61-201ENST00000585825 1298 ntBASIC20.02■□□□□ 0.8
CBX6O95503 AC073111.5-205ENST00000641717 521 ntBASIC20.02■□□□□ 0.8
CBX6O95503 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX6O95503 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX6O95503 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CBX6O95503 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.02■□□□□ 0.79
CBX6O95503 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CBX6O95503 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.02■□□□□ 0.79
CBX6O95503 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CBX6O95503 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.01■□□□□ 0.79
CBX6O95503 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.01■□□□□ 0.79
CBX6O95503 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CBX6O95503 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.01■□□□□ 0.79
CBX6O95503 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.01■□□□□ 0.79
CBX6O95503 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.01■□□□□ 0.79
CBX6O95503 AC137761.2-201ENST00000561729 223 ntBASIC20.01■□□□□ 0.79
CBX6O95503 AC145350.3-201ENST00000569033 163 ntBASIC20.01■□□□□ 0.79
CBX6O95503 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CBX6O95503 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CBX6O95503 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX6O95503 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20■□□□□ 0.79
CBX6O95503 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CBX6O95503 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CBX6O95503 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20■□□□□ 0.79
CBX6O95503 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CBX6O95503 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CBX6O95503 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20■□□□□ 0.79
CBX6O95503 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX6O95503 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms