Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 OR2I1P-207ENST00000453522 948 ntBASIC17.34■□□□□ 0.37
LYRM1O43325 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.34■□□□□ 0.37
LYRM1O43325 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYRM1O43325 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.34■□□□□ 0.37
LYRM1O43325 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LYRM1O43325 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.34■□□□□ 0.37
LYRM1O43325 pRNA.6-201ENST00000610482 90 ntBASIC17.34■□□□□ 0.37
LYRM1O43325 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LYRM1O43325 pRNA.5-201ENST00000612139 90 ntBASIC17.34■□□□□ 0.37
LYRM1O43325 pRNA.11-201ENST00000618423 90 ntBASIC17.34■□□□□ 0.37
LYRM1O43325 pRNA.13-201ENST00000619112 90 ntBASIC17.34■□□□□ 0.37
LYRM1O43325 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYRM1O43325 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LYRM1O43325 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYRM1O43325 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LYRM1O43325 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYRM1O43325 AC090340.1-201ENST00000620778 4980 ntBASIC17.33■□□□□ 0.37
LYRM1O43325 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.33■□□□□ 0.37
LYRM1O43325 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LYRM1O43325 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 AL691432.2-201ENST00000607222 2038 ntBASIC17.33■□□□□ 0.37
LYRM1O43325 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.33■□□□□ 0.37
LYRM1O43325 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
LYRM1O43325 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.33■□□□□ 0.37
LYRM1O43325 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM1O43325 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
LYRM1O43325 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LYRM1O43325 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.33■□□□□ 0.36
LYRM1O43325 MIR4449-201ENST00000578365 66 ntBASIC17.33■□□□□ 0.36
LYRM1O43325 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM1O43325 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM1O43325 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM1O43325 LINC01465-201ENST00000408887 1940 ntBASIC17.33■□□□□ 0.36
LYRM1O43325 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM1O43325 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LYRM1O43325 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.33■□□□□ 0.36
LYRM1O43325 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM1O43325 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM1O43325 AC020916.1-201ENST00000587762 1774 ntBASIC17.33■□□□□ 0.36
LYRM1O43325 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM1O43325 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LYRM1O43325 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.32■□□□□ 0.36
LYRM1O43325 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LYRM1O43325 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LYRM1O43325 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.32■□□□□ 0.36
LYRM1O43325 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LYRM1O43325 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.32■□□□□ 0.36
LYRM1O43325 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LYRM1O43325 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.32■□□□□ 0.36
LYRM1O43325 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.32■□□□□ 0.36
LYRM1O43325 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.32■□□□□ 0.36
LYRM1O43325 AIRN-201ENST00000601203 4374 ntBASIC17.32■□□□□ 0.36
LYRM1O43325 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
LYRM1O43325 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM1O43325 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LYRM1O43325 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
LYRM1O43325 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.31■□□□□ 0.36
LYRM1O43325 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.31■□□□□ 0.36
LYRM1O43325 MIR4508-201ENST00000584178 70 ntBASIC17.31■□□□□ 0.36
LYRM1O43325 AC010980.1-201ENST00000587192 1142 ntBASIC17.31■□□□□ 0.36
LYRM1O43325 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.31■□□□□ 0.36
LYRM1O43325 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LYRM1O43325 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM1O43325 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms