Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.68□□□□□ -0.06
NACAE9PAV3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.68□□□□□ -0.06
NACAE9PAV3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NACAE9PAV3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 AL512408.1-201ENST00000569378 2000 ntBASIC14.67□□□□□ -0.06
NACAE9PAV3 AC112907.3-201ENST00000577781 2400 ntBASIC14.67□□□□□ -0.06
NACAE9PAV3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.67□□□□□ -0.06
NACAE9PAV3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.67□□□□□ -0.06
NACAE9PAV3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.67□□□□□ -0.06
NACAE9PAV3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
NACAE9PAV3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 AC245052.3-201ENST00000450182 901 ntBASIC14.67□□□□□ -0.06
NACAE9PAV3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NACAE9PAV3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.67□□□□□ -0.06
NACAE9PAV3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NACAE9PAV3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 AC011484.1-201ENST00000377652 1995 ntBASIC14.66□□□□□ -0.06
NACAE9PAV3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.66□□□□□ -0.06
NACAE9PAV3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NACAE9PAV3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NACAE9PAV3 AC006970.2-201ENST00000450065 779 ntBASIC14.66□□□□□ -0.06
NACAE9PAV3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.66□□□□□ -0.06
NACAE9PAV3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.66□□□□□ -0.06
NACAE9PAV3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
NACAE9PAV3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.66□□□□□ -0.06
NACAE9PAV3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
NACAE9PAV3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.66□□□□□ -0.06
NACAE9PAV3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.66□□□□□ -0.06
NACAE9PAV3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NACAE9PAV3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
NACAE9PAV3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.66□□□□□ -0.06
NACAE9PAV3 AL355802.2-201ENST00000402069 882 ntBASIC14.65□□□□□ -0.06
NACAE9PAV3 NCF1B-203ENST00000435988 1254 ntBASIC14.65□□□□□ -0.06
NACAE9PAV3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.65□□□□□ -0.06
NACAE9PAV3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.65□□□□□ -0.06
NACAE9PAV3 AFG3L1P-217ENST00000557444 2447 ntBASIC14.65□□□□□ -0.06
NACAE9PAV3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NACAE9PAV3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.65□□□□□ -0.06
NACAE9PAV3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NACAE9PAV3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 RBM17P2-201ENST00000616397 1405 ntBASIC14.65□□□□□ -0.06
NACAE9PAV3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.65□□□□□ -0.06
NACAE9PAV3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.65□□□□□ -0.06
NACAE9PAV3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.65□□□□□ -0.06
NACAE9PAV3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NACAE9PAV3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.65□□□□□ -0.06
NACAE9PAV3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.65□□□□□ -0.06
NACAE9PAV3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.65□□□□□ -0.06
NACAE9PAV3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms