Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 COCH-204ENST00000468826 2129 ntTSL 25.32□□□□□ -1.569e-6■■□□□ 12.6
PRPF8Q6P2Q9 SPG11-221ENST00000560299 437 ntTSL 35.28□□□□□ -1.569e-6■■□□□ 12.6
PRPF8Q6P2Q9 VPS53-209ENST00000570771 366 ntTSL 35.24□□□□□ -1.579e-6■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-219ENST00000485433 524 ntTSL 45.22□□□□□ -1.578e-12■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-227ENST00000496368 542 ntTSL 45.22□□□□□ -1.578e-12■■□□□ 12.6
PRPF8Q6P2Q9 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.584e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.589e-6■■□□□ 12.6
PRPF8Q6P2Q9 FAM204A-207ENST00000470476 1000 ntTSL 55.15□□□□□ -1.599e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-228ENST00000486224 526 ntTSL 35.14□□□□□ -1.599e-6■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-214ENST00000480611 591 ntTSL 45.1□□□□□ -1.598e-12■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-215ENST00000596678 518 ntTSL 55.07□□□□□ -1.61e-10■■□□□ 12.6
PRPF8Q6P2Q9 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.05□□□□□ -1.69e-6■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-215ENST00000549220 557 ntTSL 45.02□□□□□ -1.619e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-213ENST00000544044 572 ntTSL 55.01□□□□□ -1.619e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF248-205ENST00000395874 436 ntTSL 35.01□□□□□ -1.619e-6■■□□□ 12.6
PRPF8Q6P2Q9 RMND5A-202ENST00000466417 486 ntTSL 54.99□□□□□ -1.619e-6■■□□□ 12.6
PRPF8Q6P2Q9 VIRMA-204ENST00000519001 460 ntTSL 34.98□□□□□ -1.619e-6■■□□□ 12.6
PRPF8Q6P2Q9 HACE1-208ENST00000518402 1521 ntTSL 54.96□□□□□ -1.629e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-222ENST00000514515 3564 ntTSL 1 (best)4.85□□□□□ -1.633e-18■■□□□ 12.6
PRPF8Q6P2Q9 ARHGAP26-203ENST00000378013 564 ntTSL 44.83□□□□□ -1.649e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.83□□□□□ -1.649e-6■■□□□ 12.6
PRPF8Q6P2Q9 CAPN7-206ENST00000463417 2319 ntTSL 24.82□□□□□ -1.643e-8■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-203ENST00000398707 2282 ntTSL 24.74□□□□□ -1.659e-6■■□□□ 12.6
PRPF8Q6P2Q9 PVT1-205ENST00000517790 599 ntTSL 24.63□□□□□ -1.671e-10■■□□□ 12.6
PRPF8Q6P2Q9 EBLN3P-201ENST00000625218 311 ntTSL 24.62□□□□□ -1.679e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-208ENST00000618008 647 ntTSL 34.61□□□□□ -1.679e-6■■□□□ 12.6
PRPF8Q6P2Q9 OTUD4-204ENST00000504331 591 ntTSL 34.52□□□□□ -1.699e-6■■□□□ 12.6
PRPF8Q6P2Q9 RFC1-212ENST00000510783 723 ntTSL 34.43□□□□□ -1.79e-6■■□□□ 12.6
PRPF8Q6P2Q9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.719e-6■■□□□ 12.6
PRPF8Q6P2Q9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.719e-6■■□□□ 12.6
PRPF8Q6P2Q9 ELF2-206ENST00000504314 563 ntTSL 34.35□□□□□ -1.713e-8■■□□□ 12.6
PRPF8Q6P2Q9 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.729e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-208ENST00000533488 639 ntTSL 34.26□□□□□ -1.739e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-221ENST00000513684 503 ntTSL 54.21□□□□□ -1.743e-18■■□□□ 12.6
PRPF8Q6P2Q9 CNN3-204ENST00000461018 568 ntTSL 24.2□□□□□ -1.749e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF232-207ENST00000575538 574 ntTSL 54.2□□□□□ -1.743e-8■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.16□□□□□ -1.748e-12■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-204ENST00000529515 518 ntAPPRIS ALT2 TSL 34.09□□□□□ -1.759e-6■■□□□ 12.6
PRPF8Q6P2Q9 ASCC2-203ENST00000411532 261 ntTSL 54.04□□□□□ -1.769e-6■■□□□ 12.6
PRPF8Q6P2Q9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4□□□□□ -1.775e-8■■□□□ 12.6
PRPF8Q6P2Q9 KMT2C-213ENST00000558665 538 ntTSL 33.88□□□□□ -1.799e-6■■□□□ 12.6
PRPF8Q6P2Q9 MKLN1-AS-205ENST00000447904 875 ntTSL 53.84□□□□□ -1.799e-6■■□□□ 12.6
PRPF8Q6P2Q9 PDPR-205ENST00000563930 551 ntTSL 43.82□□□□□ -1.89e-6■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-212ENST00000495271 744 ntTSL 53.7□□□□□ -1.829e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-210ENST00000503429 1079 ntTSL 1 (best)3.67□□□□□ -1.823e-18■■□□□ 12.6
PRPF8Q6P2Q9 ATIC-212ENST00000478734 486 ntTSL 23.65□□□□□ -1.829e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-230ENST00000507877 578 ntTSL 43.62□□□□□ -1.839e-6■■□□□ 12.6
PRPF8Q6P2Q9 HACE1-206ENST00000517995 2809 ntTSL 1 (best)3.54□□□□□ -1.849e-6■■□□□ 12.6
PRPF8Q6P2Q9 FNTA-207ENST00000528400 601 ntTSL 23.41□□□□□ -1.869e-6■■□□□ 12.6
PRPF8Q6P2Q9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.879e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-214ENST00000507742 577 ntTSL 23.24□□□□□ -1.893e-18■■□□□ 12.6
PRPF8Q6P2Q9 PTP4A2-207ENST00000494444 678 ntTSL 53.2□□□□□ -1.98e-12■■□□□ 12.6
PRPF8Q6P2Q9 AMBRA1-203ENST00000524783 427 ntTSL 33.19□□□□□ -1.98e-12■■□□□ 12.6
PRPF8Q6P2Q9 CNNM2-204ENST00000475511 531 ntTSL 33.16□□□□□ -1.99e-6■■□□□ 12.6
PRPF8Q6P2Q9 EBLN3P-203ENST00000627197 579 ntTSL 23.15□□□□□ -1.99e-6■■□□□ 12.6
PRPF8Q6P2Q9 MFSD8-203ENST00000504126 545 ntTSL 43.07□□□□□ -1.929e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-209ENST00000618422 649 ntTSL 33.04□□□□□ -1.929e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-213ENST00000434420 386 ntTSL 42.95□□□□□ -1.949e-6■■□□□ 12.6
PRPF8Q6P2Q9 RFC1-216ENST00000514572 584 ntTSL 22.93□□□□□ -1.949e-6■■□□□ 12.6
PRPF8Q6P2Q9 DDHD1-205ENST00000555400 2722 ntTSL 22.74□□□□□ -1.979e-6■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-204ENST00000391837 738 ntTSL 52.7□□□□□ -1.989e-6■■□□□ 12.6
PRPF8Q6P2Q9 YIPF6-207ENST00000496576 486 ntTSL 22.7□□□□□ -1.989e-6■■□□□ 12.6
PRPF8Q6P2Q9 SF3B1-212ENST00000496458 475 ntTSL 22.58□□□□□ -29e-6■■□□□ 12.6
PRPF8Q6P2Q9 PLAA-206ENST00000521968 457 ntTSL 22.52□□□□□ -2.019e-6■■□□□ 12.6
PRPF8Q6P2Q9 HACE1-203ENST00000369127 5318 ntTSL 1 (best)2.48□□□□□ -2.019e-6■■□□□ 12.6
PRPF8Q6P2Q9 ATP5J2-207ENST00000481899 738 ntTSL 22.39□□□□□ -2.038e-12■■□□□ 12.6
PRPF8Q6P2Q9 ZHX2-202ENST00000534247 873 ntTSL 32.39□□□□□ -2.039e-6■■□□□ 12.6
PRPF8Q6P2Q9 FXR1-204ENST00000461044 601 ntTSL 42.33□□□□□ -2.043e-8■■□□□ 12.6
PRPF8Q6P2Q9 TXNDC9-207ENST00000463385 1099 ntTSL 22.28□□□□□ -2.059e-6■■□□□ 12.6
PRPF8Q6P2Q9 RFC1-209ENST00000504974 495 ntTSL 52.14□□□□□ -2.079e-6■■□□□ 12.6
PRPF8Q6P2Q9 RFC1-205ENST00000502991 567 ntTSL 42.13□□□□□ -2.079e-6■■□□□ 12.6
PRPF8Q6P2Q9 CAPN7-207ENST00000472400 501 ntTSL 22.06□□□□□ -2.083e-8■■□□□ 12.6
PRPF8Q6P2Q9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.05□□□□□ -2.083e-18■■□□□ 12.6
PRPF8Q6P2Q9 ACBD3-202ENST00000464927 294 ntTSL 21.91□□□□□ -2.19e-6■■□□□ 12.6
PRPF8Q6P2Q9 MIR6779-201ENST00000617283 64 ntBASIC1.9□□□□□ -2.19e-6■■□□□ 12.6
PRPF8Q6P2Q9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.86□□□□□ -2.119e-6■■□□□ 12.6
PRPF8Q6P2Q9 KTN1-216ENST00000554570 521 ntTSL 51.81□□□□□ -2.129e-6■■□□□ 12.6
PRPF8Q6P2Q9 DDHD1-207ENST00000556027 3951 ntTSL 1 (best)1.77□□□□□ -2.139e-6■■□□□ 12.6
PRPF8Q6P2Q9 ADAT1-210ENST00000568510 459 ntTSL 31.72□□□□□ -2.139e-6■■□□□ 12.6
PRPF8Q6P2Q9 DONSON-213ENST00000462566 430 ntTSL 21.68□□□□□ -2.143e-8■■□□□ 12.6
PRPF8Q6P2Q9 RIF1-212ENST00000498041 776 ntTSL 31.65□□□□□ -2.159e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIK3R1-206ENST00000518292 558 ntTSL 31.44□□□□□ -2.189e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIK3R1-215ENST00000523807 552 ntTSL 41.44□□□□□ -2.189e-6■■□□□ 12.6
PRPF8Q6P2Q9 SF3B1-205ENST00000424674 723 ntTSL 41.23□□□□□ -2.219e-6■■□□□ 12.6
PRPF8Q6P2Q9 DNAJC16-206ENST00000479655 510 ntTSL 31.03□□□□□ -2.259e-6■■□□□ 12.6
PRPF8Q6P2Q9 GINM1-202ENST00000433539 563 ntTSL 30.89□□□□□ -2.279e-6■■□□□ 12.6
PRPF8Q6P2Q9 TTC3-213ENST00000469939 739 ntTSL 20.86□□□□□ -2.279e-6■■□□□ 12.6
PRPF8Q6P2Q9 TXNDC9-203ENST00000409705 568 ntTSL 40.84□□□□□ -2.279e-6■■□□□ 12.6
PRPF8Q6P2Q9 DPY19L1-206ENST00000481923 566 ntTSL 40.63□□□□□ -2.319e-6■■□□□ 12.6
PRPF8Q6P2Q9 DNAJC16-204ENST00000472665 445 ntTSL 50.62□□□□□ -2.319e-6■■□□□ 12.6
PRPF8Q6P2Q9 MFSD8-250ENST00000641830 639 nt0.58□□□□□ -2.329e-6■■□□□ 12.6
PRPF8Q6P2Q9 TXNDC9-204ENST00000422767 768 ntTSL 50.54□□□□□ -2.329e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-212ENST00000433533 471 ntTSL 30.42□□□□□ -2.349e-6■■□□□ 12.6
PRPF8Q6P2Q9 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.35□□□□□ -2.359e-6■■□□□ 12.6
PRPF8Q6P2Q9 PTK2-211ENST00000519361 553 ntTSL 50.27□□□□□ -2.379e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIK3R1-214ENST00000522084 705 ntTSL 30.15□□□□□ -2.399e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIK3R1-212ENST00000521409 540 ntTSL 40.03□□□□□ -2.49e-6■■□□□ 12.6
PRPF8Q6P2Q9 WASHC5-207ENST00000523397 517 ntTSL 2-0.12□□□□□ -2.439e-6■■□□□ 12.6
PRPF8Q6P2Q9 FAM204A-210ENST00000491416 576 ntTSL 2-0.38□□□□□ -2.479e-6■■□□□ 12.6
PRPF8Q6P2Q9 PTK2-229ENST00000521172 507 ntTSL 5-0.46□□□□□ -2.489e-6■■□□□ 12.6
Retrieved 100 of 73,762 protein–RNA pairs in 557.9 ms