RNA–Protein interactions for RNA: ENST00000554570.1

KTN1-216, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-216ENST00000554570 AEBP2Q6ZN18 517 aaPredicted RBP25.96■■□□□ 1.75
KTN1-216ENST00000554570 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
KTN1-216ENST00000554570 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
KTN1-216ENST00000554570 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
KTN1-216ENST00000554570 FOXD1Q16676 465 aa20.47■□□□□ 0.87
KTN1-216ENST00000554570 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
KTN1-216ENST00000554570 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
KTN1-216ENST00000554570 ADRA2BP18089 450 aa19.55■□□□□ 0.72
KTN1-216ENST00000554570 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
KTN1-216ENST00000554570 MSH5O43196 834 aa18.97■□□□□ 0.63
KTN1-216ENST00000554570 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
KTN1-216ENST00000554570 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
KTN1-216ENST00000554570 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
KTN1-216ENST00000554570 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
KTN1-216ENST00000554570 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
KTN1-216ENST00000554570 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
KTN1-216ENST00000554570 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
KTN1-216ENST00000554570 KCNA4P22459 653 aa17.41■□□□□ 0.38
KTN1-216ENST00000554570 RNF216Q9NWF9 866 aaPredicted RBP17.24■□□□□ 0.35
KTN1-216ENST00000554570 NPM3O75607 178 aaKnown RBP17.23■□□□□ 0.35
KTN1-216ENST00000554570 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
KTN1-216ENST00000554570 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
KTN1-216ENST00000554570 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
KTN1-216ENST00000554570 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
KTN1-216ENST00000554570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.24e-7■□□□□ 10
KTN1-216ENST00000554570 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
KTN1-216ENST00000554570 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
KTN1-216ENST00000554570 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
KTN1-216ENST00000554570 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
KTN1-216ENST00000554570 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
KTN1-216ENST00000554570 ZBTB22O15209 634 aa16.02■□□□□ 0.16
KTN1-216ENST00000554570 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
KTN1-216ENST00000554570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.89■□□□□ 0.13
KTN1-216ENST00000554570 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
KTN1-216ENST00000554570 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
KTN1-216ENST00000554570 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
KTN1-216ENST00000554570 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
KTN1-216ENST00000554570 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
KTN1-216ENST00000554570 APLP2Q06481 763 aa15.74■□□□□ 0.11
KTN1-216ENST00000554570 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
KTN1-216ENST00000554570 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
KTN1-216ENST00000554570 CAPN15O75808 1086 aa15.57■□□□□ 0.08
KTN1-216ENST00000554570 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
KTN1-216ENST00000554570 ATF5Q9Y2D1 282 aaPredicted RBP15.48■□□□□ 0.07
KTN1-216ENST00000554570 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
KTN1-216ENST00000554570 DSG3P32926 999 aa15.4■□□□□ 0.06
KTN1-216ENST00000554570 ABCB7O75027 752 aa15.23■□□□□ 0.03
KTN1-216ENST00000554570 POLA2Q14181 598 aa15.22■□□□□ 0.03
KTN1-216ENST00000554570 ZBTB12Q9Y330 459 aaPredicted RBP15.01□□□□□ -0.01
KTN1-216ENST00000554570 FBLN2P98095 1184 aa14.86□□□□□ -0.03
KTN1-216ENST00000554570 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
KTN1-216ENST00000554570 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
KTN1-216ENST00000554570 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
KTN1-216ENST00000554570 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
KTN1-216ENST00000554570 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
KTN1-216ENST00000554570 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
KTN1-216ENST00000554570 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
KTN1-216ENST00000554570 ZNF692Q9BU19 519 aaPredicted RBP14.47□□□□□ -0.09
KTN1-216ENST00000554570 SSUH2Q9Y2M2 353 aa14.47□□□□□ -0.09
KTN1-216ENST00000554570 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
KTN1-216ENST00000554570 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
KTN1-216ENST00000554570 FKBP8Q14318 412 aa14.29□□□□□ -0.12
KTN1-216ENST00000554570 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
KTN1-216ENST00000554570 PROM2Q8N271 834 aa14.24□□□□□ -0.13
KTN1-216ENST00000554570 SPDYE1Q8NFV5 336 aaPredicted RBP14.17□□□□□ -0.14
KTN1-216ENST00000554570 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
KTN1-216ENST00000554570 CHRDL2Q6WN34 429 aa14.1□□□□□ -0.15
KTN1-216ENST00000554570 STAG3Q9UJ98 1225 aa14.06□□□□□ -0.16
KTN1-216ENST00000554570 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
KTN1-216ENST00000554570 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
KTN1-216ENST00000554570 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.182e-10■■□□□ 13
KTN1-216ENST00000554570 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
KTN1-216ENST00000554570 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
KTN1-216ENST00000554570 POTEHQ6S545 545 aa13.8□□□□□ -0.2
KTN1-216ENST00000554570 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
KTN1-216ENST00000554570 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
KTN1-216ENST00000554570 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
KTN1-216ENST00000554570 MIER1Q8N108 512 aa13.67□□□□□ -0.22
KTN1-216ENST00000554570 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
KTN1-216ENST00000554570 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
KTN1-216ENST00000554570 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
KTN1-216ENST00000554570 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
KTN1-216ENST00000554570 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
KTN1-216ENST00000554570 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
KTN1-216ENST00000554570 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
KTN1-216ENST00000554570 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
KTN1-216ENST00000554570 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
KTN1-216ENST00000554570 HAX1O00165 279 aa13.45□□□□□ -0.26
KTN1-216ENST00000554570 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
KTN1-216ENST00000554570 NUBP1P53384 320 aa13.38□□□□□ -0.27
KTN1-216ENST00000554570 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
KTN1-216ENST00000554570 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
KTN1-216ENST00000554570 EVX2Q03828 476 aa13.33□□□□□ -0.28
KTN1-216ENST00000554570 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
KTN1-216ENST00000554570 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
KTN1-216ENST00000554570 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
KTN1-216ENST00000554570 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
KTN1-216ENST00000554570 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
KTN1-216ENST00000554570 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
KTN1-216ENST00000554570 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms