RNA–Protein interactions for RNA: ENST00000510783.5

RFC1-212, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 723 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-212ENST00000510783 AEBP2Q6ZN18 517 aaPredicted RBP31.01■■■□□ 2.55
RFC1-212ENST00000510783 CHIC1Q5VXU3 224 aa29.83■■■□□ 2.37
RFC1-212ENST00000510783 SENP3Q9H4L4 574 aaPredicted RBP26.35■■□□□ 1.81
RFC1-212ENST00000510783 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
RFC1-212ENST00000510783 FOXD1Q16676 465 aa24.54■■□□□ 1.52
RFC1-212ENST00000510783 PLPPR3Q6T4P5 718 aa24.02■■□□□ 1.44
RFC1-212ENST00000510783 PPP6R1Q9UPN7 881 aa23.29■■□□□ 1.32
RFC1-212ENST00000510783 ADRA2BP18089 450 aa23.24■■□□□ 1.31
RFC1-212ENST00000510783 PIAS4Q8N2W9 510 aaPredicted RBP23.03■■□□□ 1.28
RFC1-212ENST00000510783 MSH5O43196 834 aa22.76■■□□□ 1.23
RFC1-212ENST00000510783 POTEDQ86YR6 584 aa21.53■■□□□ 1.04
RFC1-212ENST00000510783 MAPK8IP2Q13387 824 aaPredicted RBP21.23■□□□□ 0.99
RFC1-212ENST00000510783 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
RFC1-212ENST00000510783 PPP4R3CPQ6ZMV5 832 aa21.13■□□□□ 0.97
RFC1-212ENST00000510783 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
RFC1-212ENST00000510783 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
RFC1-212ENST00000510783 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
RFC1-212ENST00000510783 HOXD11P31277 338 aaPredicted RBP20.35■□□□□ 0.85
RFC1-212ENST00000510783 RNF216Q9NWF9 866 aaPredicted RBP20.32■□□□□ 0.84
RFC1-212ENST00000510783 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
RFC1-212ENST00000510783 KCNA4P22459 653 aa20.16■□□□□ 0.82
RFC1-212ENST00000510783 DCAF8L1A6NGE4 600 aa20.13■□□□□ 0.81
RFC1-212ENST00000510783 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
RFC1-212ENST00000510783 RNF39Q9H2S5 420 aa19.47■□□□□ 0.71
RFC1-212ENST00000510783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.74e-7■■□□□ 11.8
RFC1-212ENST00000510783 CACNB1Q02641 598 aaPredicted RBP19.31■□□□□ 0.68
RFC1-212ENST00000510783 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
RFC1-212ENST00000510783 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
RFC1-212ENST00000510783 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
RFC1-212ENST00000510783 U3KPZ7 1027 aaPredicted RBP19.05■□□□□ 0.64
RFC1-212ENST00000510783 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
RFC1-212ENST00000510783 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
RFC1-212ENST00000510783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
RFC1-212ENST00000510783 CAPN15O75808 1086 aa18.62■□□□□ 0.57
RFC1-212ENST00000510783 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
RFC1-212ENST00000510783 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
RFC1-212ENST00000510783 ZBTB22O15209 634 aa18.55■□□□□ 0.56
RFC1-212ENST00000510783 SAMD1Q6SPF0 538 aaPredicted RBP18.55■□□□□ 0.56
RFC1-212ENST00000510783 APLP2Q06481 763 aa18.52■□□□□ 0.56
RFC1-212ENST00000510783 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
RFC1-212ENST00000510783 DSG3P32926 999 aa18.4■□□□□ 0.54
RFC1-212ENST00000510783 ZNF219Q9P2Y4 722 aaPredicted RBP18.37■□□□□ 0.53
RFC1-212ENST00000510783 ABCB7O75027 752 aa18.24■□□□□ 0.51
RFC1-212ENST00000510783 ATF5Q9Y2D1 282 aaPredicted RBP18.19■□□□□ 0.5
RFC1-212ENST00000510783 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
RFC1-212ENST00000510783 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
RFC1-212ENST00000510783 POLA2Q14181 598 aa18.02■□□□□ 0.48
RFC1-212ENST00000510783 ATXN8OSP0DMR3 200 aa18.01■□□□□ 0.47
RFC1-212ENST00000510783 ZBTB12Q9Y330 459 aaPredicted RBP17.63■□□□□ 0.41
RFC1-212ENST00000510783 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
RFC1-212ENST00000510783 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
RFC1-212ENST00000510783 FBLN2P98095 1184 aa17.42■□□□□ 0.38
RFC1-212ENST00000510783 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
RFC1-212ENST00000510783 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
RFC1-212ENST00000510783 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
RFC1-212ENST00000510783 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
RFC1-212ENST00000510783 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
RFC1-212ENST00000510783 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
RFC1-212ENST00000510783 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
RFC1-212ENST00000510783 CHRDL2Q6WN34 429 aa16.98■□□□□ 0.31
RFC1-212ENST00000510783 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
RFC1-212ENST00000510783 POTEHQ6S545 545 aa16.96■□□□□ 0.31
RFC1-212ENST00000510783 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
RFC1-212ENST00000510783 PABPN1Q86U42 306 aaKnown RBP eCLIP16.81■□□□□ 0.28
RFC1-212ENST00000510783 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
RFC1-212ENST00000510783 SPDYE1Q8NFV5 336 aaPredicted RBP16.75■□□□□ 0.27
RFC1-212ENST00000510783 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
RFC1-212ENST00000510783 PIP4P2Q8N4L2 257 aa16.68■□□□□ 0.26
RFC1-212ENST00000510783 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.251e-7■■■□□ 17.4
RFC1-212ENST00000510783 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
RFC1-212ENST00000510783 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.23
RFC1-212ENST00000510783 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
RFC1-212ENST00000510783 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
RFC1-212ENST00000510783 PROM2Q8N271 834 aa16.38■□□□□ 0.21
RFC1-212ENST00000510783 FKBP8Q14318 412 aa16.37■□□□□ 0.21
RFC1-212ENST00000510783 HAX1O00165 279 aa16.28■□□□□ 0.2
RFC1-212ENST00000510783 CREBZFQ9NS37 354 aa16.2■□□□□ 0.18
RFC1-212ENST00000510783 FARP1Q9Y4F1 1045 aaPredicted RBP16.16■□□□□ 0.18
RFC1-212ENST00000510783 EVX2Q03828 476 aa16.12■□□□□ 0.17
RFC1-212ENST00000510783 C19orf67A6NJJ6 358 aa16.09■□□□□ 0.17
RFC1-212ENST00000510783 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
RFC1-212ENST00000510783 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
RFC1-212ENST00000510783 CD44P16070 742 aaKnown RBP15.96■□□□□ 0.15
RFC1-212ENST00000510783 MIER1Q8N108 512 aa15.95■□□□□ 0.14
RFC1-212ENST00000510783 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
RFC1-212ENST00000510783 PLEKHG5O94827 1062 aa15.87■□□□□ 0.13
RFC1-212ENST00000510783 PLCD3Q8N3E9 789 aa15.87■□□□□ 0.13
RFC1-212ENST00000510783 FBXO3Q9UK99 471 aa15.87■□□□□ 0.13
RFC1-212ENST00000510783 ZRANB1Q9UGI0 708 aa15.81■□□□□ 0.12
RFC1-212ENST00000510783 GABBR2O75899 941 aa15.76■□□□□ 0.11
RFC1-212ENST00000510783 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
RFC1-212ENST00000510783 ZNF579Q8NAF0 562 aaKnown RBP15.71■□□□□ 0.11
RFC1-212ENST00000510783 VASPP50552 380 aaPredicted RBP15.69■□□□□ 0.1
RFC1-212ENST00000510783 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
RFC1-212ENST00000510783 TSPYL2Q9H2G4 693 aaPredicted RBP15.67■□□□□ 0.1
RFC1-212ENST00000510783 RASEFQ8IZ41 740 aa15.62■□□□□ 0.09
RFC1-212ENST00000510783 PHF12Q96QT6 1004 aa15.62■□□□□ 0.09
RFC1-212ENST00000510783 CLCN6P51797 869 aa15.6■□□□□ 0.09
RFC1-212ENST00000510783 NUBP1P53384 320 aa15.58■□□□□ 0.08
RFC1-212ENST00000510783 KLHL34Q8N239 644 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms