RNA–Protein interactions for RNA: ENST00000463417.5

CAPN7-206, Transcript of calpain 7, humanhuman

TSL 2

Gene CAPN7, Length 2,319 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-206ENST00000463417 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
CAPN7-206ENST00000463417 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
CAPN7-206ENST00000463417 PHF23Q9BUL5 403 aaPredicted RBP15.27■□□□□ 0.03
CAPN7-206ENST00000463417 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
CAPN7-206ENST00000463417 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
CAPN7-206ENST00000463417 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
CAPN7-206ENST00000463417 KCNA4P22459 653 aa13.66□□□□□ -0.22
CAPN7-206ENST00000463417 ADRA2BP18089 450 aa13.55□□□□□ -0.24
CAPN7-206ENST00000463417 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
CAPN7-206ENST00000463417 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
CAPN7-206ENST00000463417 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
CAPN7-206ENST00000463417 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
CAPN7-206ENST00000463417 FOXD1Q16676 465 aa12.84□□□□□ -0.35
CAPN7-206ENST00000463417 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
CAPN7-206ENST00000463417 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
CAPN7-206ENST00000463417 ZBTB22O15209 634 aa12.65□□□□□ -0.38
CAPN7-206ENST00000463417 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
CAPN7-206ENST00000463417 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
CAPN7-206ENST00000463417 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
CAPN7-206ENST00000463417 NISCHQ9Y2I1 1504 aa12.36□□□□□ -0.43
CAPN7-206ENST00000463417 PIAS4Q8N2W9 510 aaPredicted RBP12.32□□□□□ -0.44
CAPN7-206ENST00000463417 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
CAPN7-206ENST00000463417 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
CAPN7-206ENST00000463417 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
CAPN7-206ENST00000463417 HRCP23327 699 aa12.07□□□□□ -0.48
CAPN7-206ENST00000463417 FKBP8Q14318 412 aa11.94□□□□□ -0.5
CAPN7-206ENST00000463417 MYT1Q01538 1121 aa11.85□□□□□ -0.51
CAPN7-206ENST00000463417 DNAJC5BQ9UF47 199 aa11.84□□□□□ -0.51
CAPN7-206ENST00000463417 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
CAPN7-206ENST00000463417 PPARGC1BQ86YN6 1023 aaKnown RBP11.75□□□□□ -0.53
CAPN7-206ENST00000463417 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
CAPN7-206ENST00000463417 SLC4A2P04920 1241 aa11.65□□□□□ -0.54
CAPN7-206ENST00000463417 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
CAPN7-206ENST00000463417 PCGF6Q9BYE7 350 aa11.57□□□□□ -0.56
CAPN7-206ENST00000463417 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
CAPN7-206ENST00000463417 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
CAPN7-206ENST00000463417 PLCB2Q00722 1185 aa11.52□□□□□ -0.57
CAPN7-206ENST00000463417 MYO15BQ96JP2 1530 aa11.48□□□□□ -0.57
CAPN7-206ENST00000463417 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
CAPN7-206ENST00000463417 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
CAPN7-206ENST00000463417 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
CAPN7-206ENST00000463417 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
CAPN7-206ENST00000463417 BCANQ96GW7 911 aa11.34□□□□□ -0.59
CAPN7-206ENST00000463417 TTBK1Q5TCY1 1321 aaPredicted RBP11.31□□□□□ -0.6
CAPN7-206ENST00000463417 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
CAPN7-206ENST00000463417 DCAF1Q9Y4B6 1507 aa11.28□□□□□ -0.6
CAPN7-206ENST00000463417 MSH5O43196 834 aa11.27□□□□□ -0.6
CAPN7-206ENST00000463417 CCDC180Q9P1Z9 1646 aa11.26□□□□□ -0.61
CAPN7-206ENST00000463417 ACIN1Q9UKV3 1341 aaKnown RBP11.21□□□□□ -0.61
CAPN7-206ENST00000463417 DMRT2Q9Y5R5 561 aa11.2□□□□□ -0.62
CAPN7-206ENST00000463417 DCAF8L2P0C7V8 631 aa11.2□□□□□ -0.62
CAPN7-206ENST00000463417 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
CAPN7-206ENST00000463417 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
CAPN7-206ENST00000463417 NEUROD1Q13562 356 aa11.15□□□□□ -0.62
CAPN7-206ENST00000463417 TRIM26Q12899 539 aaPredicted RBP11.15□□□□□ -0.62
CAPN7-206ENST00000463417 SUPT5HO00267 1087 aaKnown RBP11.14□□□□□ -0.63
CAPN7-206ENST00000463417 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
CAPN7-206ENST00000463417 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
CAPN7-206ENST00000463417 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
CAPN7-206ENST00000463417 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
CAPN7-206ENST00000463417 FBLN2P98095 1184 aa11.04□□□□□ -0.64
CAPN7-206ENST00000463417 SHROOM4Q9ULL8 1493 aa11.04□□□□□ -0.64
CAPN7-206ENST00000463417 VASPP50552 380 aaPredicted RBP11.02□□□□□ -0.64
CAPN7-206ENST00000463417 PKD2Q13563 968 aa11.02□□□□□ -0.64
CAPN7-206ENST00000463417 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
CAPN7-206ENST00000463417 BCL11AQ9H165 835 aa11.01□□□□□ -0.65
CAPN7-206ENST00000463417 CENPBP07199 599 aaPredicted RBP10.97□□□□□ -0.65
CAPN7-206ENST00000463417 APLP2Q06481 763 aa10.96□□□□□ -0.66
CAPN7-206ENST00000463417 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
CAPN7-206ENST00000463417 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
CAPN7-206ENST00000463417 FAM9AQ8IZU1 332 aaPredicted RBP10.92□□□□□ -0.66
CAPN7-206ENST00000463417 ERICH6Q7L0X2 663 aa10.92□□□□□ -0.66
CAPN7-206ENST00000463417 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
CAPN7-206ENST00000463417 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
CAPN7-206ENST00000463417 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
CAPN7-206ENST00000463417 PROM2Q8N271 834 aa10.88□□□□□ -0.67
CAPN7-206ENST00000463417 NPM1P06748 294 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN7-206ENST00000463417 CFAP44Q96MT7 982 aa10.86□□□□□ -0.67
CAPN7-206ENST00000463417 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
CAPN7-206ENST00000463417 ZNF219Q9P2Y4 722 aaPredicted RBP10.84□□□□□ -0.67
CAPN7-206ENST00000463417 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.84□□□□□ -0.67
CAPN7-206ENST00000463417 U3KPZ7 1027 aaPredicted RBP10.84□□□□□ -0.67
CAPN7-206ENST00000463417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.83□□□□□ -0.68
CAPN7-206ENST00000463417 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
CAPN7-206ENST00000463417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
CAPN7-206ENST00000463417 MKRN4PQ13434 485 aaPredicted RBP10.81□□□□□ -0.68
CAPN7-206ENST00000463417 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
CAPN7-206ENST00000463417 DIEXFQ68CQ4 756 aaKnown RBP10.79□□□□□ -0.68
CAPN7-206ENST00000463417 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
CAPN7-206ENST00000463417 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
CAPN7-206ENST00000463417 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
CAPN7-206ENST00000463417 DAXXQ9UER7 740 aaPredicted RBP10.76□□□□□ -0.69
CAPN7-206ENST00000463417 ECM2O94769 699 aaPredicted RBP10.7□□□□□ -0.7
CAPN7-206ENST00000463417 RGL2O15211 777 aa10.66□□□□□ -0.7
CAPN7-206ENST00000463417 SPRYD3Q8NCJ5 442 aa10.66□□□□□ -0.7
CAPN7-206ENST00000463417 TRIM41Q8WV44 630 aa10.65□□□□□ -0.7
CAPN7-206ENST00000463417 ARXQ96QS3 562 aa10.65□□□□□ -0.7
CAPN7-206ENST00000463417 NBR1Q14596 966 aa10.61□□□□□ -0.71
CAPN7-206ENST00000463417 SPOCK2Q92563 424 aa10.59□□□□□ -0.71
CAPN7-206ENST00000463417 KLHL34Q8N239 644 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms