RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 AEBP2Q6ZN18 517 aaPredicted RBP21.02■□□□□ 0.96
CNN3-204ENST00000461018 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
CNN3-204ENST00000461018 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
CNN3-204ENST00000461018 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
CNN3-204ENST00000461018 FOXD1Q16676 465 aa16.81■□□□□ 0.28
CNN3-204ENST00000461018 POTEDQ86YR6 584 aa16■□□□□ 0.15
CNN3-204ENST00000461018 MSH5O43196 834 aa15.92■□□□□ 0.14
CNN3-204ENST00000461018 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
CNN3-204ENST00000461018 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
CNN3-204ENST00000461018 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
CNN3-204ENST00000461018 ADRA2BP18089 450 aa15.41■□□□□ 0.06
CNN3-204ENST00000461018 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
CNN3-204ENST00000461018 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
CNN3-204ENST00000461018 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
CNN3-204ENST00000461018 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
CNN3-204ENST00000461018 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
CNN3-204ENST00000461018 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
CNN3-204ENST00000461018 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CNN3-204ENST00000461018 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
CNN3-204ENST00000461018 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
CNN3-204ENST00000461018 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
CNN3-204ENST00000461018 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
CNN3-204ENST00000461018 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
CNN3-204ENST00000461018 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
CNN3-204ENST00000461018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.333e-6■□□□□ 8.5
CNN3-204ENST00000461018 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
CNN3-204ENST00000461018 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
CNN3-204ENST00000461018 CAPN15O75808 1086 aa12.58□□□□□ -0.4
CNN3-204ENST00000461018 DSG3P32926 999 aa12.55□□□□□ -0.4
CNN3-204ENST00000461018 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
CNN3-204ENST00000461018 POTEHQ6S545 545 aa12.51□□□□□ -0.41
CNN3-204ENST00000461018 KCNA4P22459 653 aa12.48□□□□□ -0.41
CNN3-204ENST00000461018 APLP2Q06481 763 aa12.36□□□□□ -0.43
CNN3-204ENST00000461018 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
CNN3-204ENST00000461018 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
CNN3-204ENST00000461018 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
CNN3-204ENST00000461018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
CNN3-204ENST00000461018 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
CNN3-204ENST00000461018 ABCB7O75027 752 aa12.23□□□□□ -0.45
CNN3-204ENST00000461018 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
CNN3-204ENST00000461018 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
CNN3-204ENST00000461018 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
CNN3-204ENST00000461018 POLA2Q14181 598 aa11.89□□□□□ -0.51
CNN3-204ENST00000461018 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
CNN3-204ENST00000461018 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
CNN3-204ENST00000461018 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
CNN3-204ENST00000461018 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
CNN3-204ENST00000461018 FOXD4L1Q9NU39 408 aa11.61□□□□□ -0.55
CNN3-204ENST00000461018 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
CNN3-204ENST00000461018 ATF5Q9Y2D1 282 aaPredicted RBP11.58□□□□□ -0.56
CNN3-204ENST00000461018 REM2Q8IYK8 340 aaPredicted RBP11.55□□□□□ -0.56
CNN3-204ENST00000461018 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
CNN3-204ENST00000461018 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
CNN3-204ENST00000461018 ZBTB22O15209 634 aa11.46□□□□□ -0.57
CNN3-204ENST00000461018 HAX1O00165 279 aa11.41□□□□□ -0.58
CNN3-204ENST00000461018 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
CNN3-204ENST00000461018 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
CNN3-204ENST00000461018 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
CNN3-204ENST00000461018 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
CNN3-204ENST00000461018 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
CNN3-204ENST00000461018 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
CNN3-204ENST00000461018 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
CNN3-204ENST00000461018 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.61
CNN3-204ENST00000461018 FBLN2P98095 1184 aa11.25□□□□□ -0.61
CNN3-204ENST00000461018 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
CNN3-204ENST00000461018 EVX2Q03828 476 aa11.17□□□□□ -0.62
CNN3-204ENST00000461018 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
CNN3-204ENST00000461018 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
CNN3-204ENST00000461018 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
CNN3-204ENST00000461018 ABCC9O60706 1549 aa11.1□□□□□ -0.63
CNN3-204ENST00000461018 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
CNN3-204ENST00000461018 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
CNN3-204ENST00000461018 SSUH2Q9Y2M2 353 aa11.05□□□□□ -0.64
CNN3-204ENST00000461018 C19orf67A6NJJ6 358 aa11.03□□□□□ -0.64
CNN3-204ENST00000461018 GABBR2O75899 941 aa10.95□□□□□ -0.66
CNN3-204ENST00000461018 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
CNN3-204ENST00000461018 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
CNN3-204ENST00000461018 PABPN1Q86U42 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
CNN3-204ENST00000461018 LHX8Q68G74 356 aa10.86□□□□□ -0.67
CNN3-204ENST00000461018 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
CNN3-204ENST00000461018 CLCN6P51797 869 aa10.75□□□□□ -0.69
CNN3-204ENST00000461018 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
CNN3-204ENST00000461018 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
CNN3-204ENST00000461018 DCBLD2Q96PD2 775 aa10.63□□□□□ -0.71
CNN3-204ENST00000461018 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
CNN3-204ENST00000461018 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
CNN3-204ENST00000461018 ZRANB1Q9UGI0 708 aa10.57□□□□□ -0.72
CNN3-204ENST00000461018 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
CNN3-204ENST00000461018 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
CNN3-204ENST00000461018 PAK3O75914 559 aaPredicted RBP10.46□□□□□ -0.73
CNN3-204ENST00000461018 GALR2O43603 387 aaPredicted RBP10.45□□□□□ -0.74
CNN3-204ENST00000461018 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
CNN3-204ENST00000461018 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
CNN3-204ENST00000461018 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
CNN3-204ENST00000461018 OTUD5Q96G74 571 aa10.36□□□□□ -0.75
CNN3-204ENST00000461018 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
CNN3-204ENST00000461018 CCDC180Q9P1Z9 1646 aa10.33□□□□□ -0.76
CNN3-204ENST00000461018 POTEB2H3BUK9 544 aa10.31□□□□□ -0.76
CNN3-204ENST00000461018 MNX1P50219 401 aaPredicted RBP10.29□□□□□ -0.76
CNN3-204ENST00000461018 PELP1Q8IZL8 1130 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms