RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, humanhuman

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NREP-222ENST00000514515 NISCHQ9Y2I1 1504 aa11.95□□□□□ -0.5
NREP-222ENST00000514515 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
NREP-222ENST00000514515 SHROOM4Q9ULL8 1493 aa10.8□□□□□ -0.68
NREP-222ENST00000514515 SUPT5HO00267 1087 aaKnown RBP10.77□□□□□ -0.69
NREP-222ENST00000514515 CHIC1Q5VXU3 224 aa10.72□□□□□ -0.69
NREP-222ENST00000514515 HRCP23327 699 aa10.5□□□□□ -0.73
NREP-222ENST00000514515 PCGF6Q9BYE7 350 aa10.49□□□□□ -0.73
NREP-222ENST00000514515 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.74
NREP-222ENST00000514515 PPARGC1BQ86YN6 1023 aaKnown RBP10.37□□□□□ -0.75
NREP-222ENST00000514515 MYO15BQ96JP2 1530 aa10.28□□□□□ -0.76
NREP-222ENST00000514515 CCDC180Q9P1Z9 1646 aa10.28□□□□□ -0.76
NREP-222ENST00000514515 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
NREP-222ENST00000514515 ZCCHC6Q5VYS8 1495 aaKnown RBP10.1□□□□□ -0.79
NREP-222ENST00000514515 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
NREP-222ENST00000514515 EHMT2Q96KQ7 1210 aa10.05□□□□□ -0.8
NREP-222ENST00000514515 FAM9AQ8IZU1 332 aaPredicted RBP10.01□□□□□ -0.81
NREP-222ENST00000514515 DCAF1Q9Y4B6 1507 aa10□□□□□ -0.81
NREP-222ENST00000514515 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
NREP-222ENST00000514515 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
NREP-222ENST00000514515 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
NREP-222ENST00000514515 SCAF1Q9H7N4 1312 aaKnown RBP9.86□□□□□ -0.83
NREP-222ENST00000514515 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
NREP-222ENST00000514515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
NREP-222ENST00000514515 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
NREP-222ENST00000514515 ACIN1Q9UKV3 1341 aaKnown RBP9.69□□□□□ -0.86
NREP-222ENST00000514515 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
NREP-222ENST00000514515 NEUROD1Q13562 356 aa9.68□□□□□ -0.86
NREP-222ENST00000514515 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
NREP-222ENST00000514515 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
NREP-222ENST00000514515 RSF1Q96T23 1441 aaPredicted RBP9.64□□□□□ -0.87
NREP-222ENST00000514515 SENP3Q9H4L4 574 aaPredicted RBP9.62□□□□□ -0.87
NREP-222ENST00000514515 YTHDC1Q96MU7 727 aaKnown RBP9.61□□□□□ -0.87
NREP-222ENST00000514515 ABCC9O60706 1549 aa9.6□□□□□ -0.87
NREP-222ENST00000514515 NACADO15069 1562 aa9.58□□□□□ -0.88
NREP-222ENST00000514515 RB1CC1Q8TDY2 1594 aa9.57□□□□□ -0.88
NREP-222ENST00000514515 SCRIBQ14160 1630 aa9.55□□□□□ -0.88
NREP-222ENST00000514515 MYT1Q01538 1121 aa9.51□□□□□ -0.89
NREP-222ENST00000514515 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
NREP-222ENST00000514515 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
NREP-222ENST00000514515 HNRNPUL2Q1KMD3 747 aaKnown RBP9.45□□□□□ -0.9
NREP-222ENST00000514515 PHF23Q9BUL5 403 aaPredicted RBP9.44□□□□□ -0.9
NREP-222ENST00000514515 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
NREP-222ENST00000514515 RANGAP1P46060 587 aaPredicted RBP9.4□□□□□ -0.9
NREP-222ENST00000514515 MIER1Q8N108 512 aa9.4□□□□□ -0.9
NREP-222ENST00000514515 UNC13AQ9UPW8 1703 aa9.39□□□□□ -0.91
NREP-222ENST00000514515 APLP2Q06481 763 aa9.37□□□□□ -0.91
NREP-222ENST00000514515 MROH2BQ7Z745 1585 aa9.36□□□□□ -0.91
NREP-222ENST00000514515 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
NREP-222ENST00000514515 CSRNP3Q8WYN3 585 aa9.34□□□□□ -0.91
NREP-222ENST00000514515 SOGA1O94964 1423 aa9.29□□□□□ -0.92
NREP-222ENST00000514515 CCDC88BA6NC98 1476 aa9.29□□□□□ -0.92
NREP-222ENST00000514515 WIZO95785 1651 aa9.29□□□□□ -0.92
NREP-222ENST00000514515 BICRAQ9NZM4 1560 aa9.28□□□□□ -0.92
NREP-222ENST00000514515 TNIKQ9UKE5 1360 aa9.27□□□□□ -0.92
NREP-222ENST00000514515 ABCC8Q09428 1581 aa9.26□□□□□ -0.93
NREP-222ENST00000514515 WRNQ14191 1432 aaPredicted RBP eCLIP9.26□□□□□ -0.93
NREP-222ENST00000514515 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.94
NREP-222ENST00000514515 ITGAEP38570 1179 aa9.18□□□□□ -0.94
NREP-222ENST00000514515 SUPT16HQ9Y5B9 1047 aaKnown RBP9.17□□□□□ -0.94
NREP-222ENST00000514515 GOLGA3Q08378 1498 aa9.17□□□□□ -0.94
NREP-222ENST00000514515 BCANQ96GW7 911 aa9.16□□□□□ -0.94
NREP-222ENST00000514515 CLIP1P30622 1438 aa9.16□□□□□ -0.94
NREP-222ENST00000514515 EEA1Q15075 1411 aa9.16□□□□□ -0.94
NREP-222ENST00000514515 BAZ1AQ9NRL2 1556 aaPredicted RBP9.15□□□□□ -0.94
NREP-222ENST00000514515 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
NREP-222ENST00000514515 CLSPNQ9HAW4 1339 aa9.09□□□□□ -0.95
NREP-222ENST00000514515 TOP2AP11388 1531 aaKnown RBP9.09□□□□□ -0.95
NREP-222ENST00000514515 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
NREP-222ENST00000514515 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
NREP-222ENST00000514515 VPS8Q8N3P4 1428 aa9.07□□□□□ -0.96
NREP-222ENST00000514515 EIF4G1Q04637 1599 aaKnown RBP9.06□□□□□ -0.96
NREP-222ENST00000514515 FKBP8Q14318 412 aa9.06□□□□□ -0.96
NREP-222ENST00000514515 KCNH8Q96L42 1107 aa9.06□□□□□ -0.96
NREP-222ENST00000514515 ANP32EQ9BTT0 268 aa9.06□□□□□ -0.96
NREP-222ENST00000514515 SMARCA2P51531 1590 aa9.05□□□□□ -0.96
NREP-222ENST00000514515 NEFLP07196 543 aa9.05□□□□□ -0.96
NREP-222ENST00000514515 KANK4Q5T7N3 995 aaPredicted RBP9.04□□□□□ -0.96
NREP-222ENST00000514515 DHX57Q6P158 1386 aaKnown RBP9.03□□□□□ -0.96
NREP-222ENST00000514515 DDX10Q13206 875 aaKnown RBP9.03□□□□□ -0.96
NREP-222ENST00000514515 RAPGEF2Q9Y4G8 1499 aa9.01□□□□□ -0.97
NREP-222ENST00000514515 ATP1B4Q9UN42 357 aaPredicted RBP9.01□□□□□ -0.97
NREP-222ENST00000514515 SMARCA4P51532 1647 aa9□□□□□ -0.97
NREP-222ENST00000514515 DNAJC5BQ9UF47 199 aa9□□□□□ -0.97
NREP-222ENST00000514515 HIRIP3Q9BW71 556 aaPredicted RBP8.99□□□□□ -0.97
NREP-222ENST00000514515 TRIM52Q96A61 297 aa8.99□□□□□ -0.97
NREP-222ENST00000514515 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
NREP-222ENST00000514515 FAM50AQ14320 339 aaKnown RBP8.97□□□□□ -0.97
NREP-222ENST00000514515 SIN3AQ96ST3 1273 aa8.95□□□□□ -0.98
NREP-222ENST00000514515 BCL11AQ9H165 835 aa8.95□□□□□ -0.98
NREP-222ENST00000514515 KIF21BO75037 1637 aa8.94□□□□□ -0.98
NREP-222ENST00000514515 ANP32CO43423 234 aa8.93□□□□□ -0.98
NREP-222ENST00000514515 ERICH6Q7L0X2 663 aa8.93□□□□□ -0.98
NREP-222ENST00000514515 CCNB3Q8WWL7 1395 aa8.93□□□□□ -0.98
NREP-222ENST00000514515 SYNJ1O43426 1573 aa8.92□□□□□ -0.98
NREP-222ENST00000514515 RBM19Q9Y4C8 960 aaKnown RBP8.92□□□□□ -0.98
NREP-222ENST00000514515 BAZ1BQ9UIG0 1483 aaKnown RBP8.92□□□□□ -0.98
NREP-222ENST00000514515 FOXD1Q16676 465 aa8.91□□□□□ -0.98
NREP-222ENST00000514515 RAB3GAP2Q9H2M9 1393 aa8.89□□□□□ -0.99
NREP-222ENST00000514515 P3H3Q8IVL6 736 aa8.89□□□□□ -0.99
NREP-222ENST00000514515 IRX6P78412 446 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms