RNA–Protein interactions for RNA: ENST00000521172.1

PTK2-229, Transcript of protein tyrosine kinase 2, humanhuman

TSL 5

Gene PTK2, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-229ENST00000521172 AEBP2Q6ZN18 517 aaPredicted RBP21.28■■□□□ 1
PTK2-229ENST00000521172 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
PTK2-229ENST00000521172 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
PTK2-229ENST00000521172 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
PTK2-229ENST00000521172 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
PTK2-229ENST00000521172 FOXD1Q16676 465 aa16.59■□□□□ 0.25
PTK2-229ENST00000521172 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
PTK2-229ENST00000521172 ADRA2BP18089 450 aa16.37■□□□□ 0.21
PTK2-229ENST00000521172 PIAS4Q8N2W9 510 aaPredicted RBP15.68■□□□□ 0.1
PTK2-229ENST00000521172 KCNA4P22459 653 aa15.61■□□□□ 0.09
PTK2-229ENST00000521172 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
PTK2-229ENST00000521172 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
PTK2-229ENST00000521172 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
PTK2-229ENST00000521172 MSH5O43196 834 aa14.98□□□□□ -0.01
PTK2-229ENST00000521172 NPM3O75607 178 aaKnown RBP14.91□□□□□ -0.02
PTK2-229ENST00000521172 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
PTK2-229ENST00000521172 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
PTK2-229ENST00000521172 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
PTK2-229ENST00000521172 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
PTK2-229ENST00000521172 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
PTK2-229ENST00000521172 ZBTB22O15209 634 aa14.42□□□□□ -0.1
PTK2-229ENST00000521172 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
PTK2-229ENST00000521172 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
PTK2-229ENST00000521172 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
PTK2-229ENST00000521172 HOXD11P31277 338 aaPredicted RBP14.26□□□□□ -0.13
PTK2-229ENST00000521172 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
PTK2-229ENST00000521172 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
PTK2-229ENST00000521172 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
PTK2-229ENST00000521172 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
PTK2-229ENST00000521172 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
PTK2-229ENST00000521172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.51□□□□□ -0.254e-7■□□□□ 9.3
PTK2-229ENST00000521172 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
PTK2-229ENST00000521172 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
PTK2-229ENST00000521172 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
PTK2-229ENST00000521172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
PTK2-229ENST00000521172 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
PTK2-229ENST00000521172 FKBP8Q14318 412 aa13.18□□□□□ -0.3
PTK2-229ENST00000521172 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
PTK2-229ENST00000521172 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
PTK2-229ENST00000521172 APLP2Q06481 763 aa12.97□□□□□ -0.33
PTK2-229ENST00000521172 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
PTK2-229ENST00000521172 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
PTK2-229ENST00000521172 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
PTK2-229ENST00000521172 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
PTK2-229ENST00000521172 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
PTK2-229ENST00000521172 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
PTK2-229ENST00000521172 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
PTK2-229ENST00000521172 CAPN15O75808 1086 aa12.77□□□□□ -0.37
PTK2-229ENST00000521172 POLA2Q14181 598 aa12.76□□□□□ -0.37
PTK2-229ENST00000521172 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
PTK2-229ENST00000521172 FBLN2P98095 1184 aa12.65□□□□□ -0.38
PTK2-229ENST00000521172 PROM2Q8N271 834 aa12.63□□□□□ -0.39
PTK2-229ENST00000521172 ABCB7O75027 752 aa12.62□□□□□ -0.39
PTK2-229ENST00000521172 DSG3P32926 999 aa12.52□□□□□ -0.41
PTK2-229ENST00000521172 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
PTK2-229ENST00000521172 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
PTK2-229ENST00000521172 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
PTK2-229ENST00000521172 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
PTK2-229ENST00000521172 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
PTK2-229ENST00000521172 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
PTK2-229ENST00000521172 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
PTK2-229ENST00000521172 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
PTK2-229ENST00000521172 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
PTK2-229ENST00000521172 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
PTK2-229ENST00000521172 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
PTK2-229ENST00000521172 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
PTK2-229ENST00000521172 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTK2-229ENST00000521172 PKD2Q13563 968 aa12.1□□□□□ -0.47
PTK2-229ENST00000521172 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
PTK2-229ENST00000521172 KLHL34Q8N239 644 aa12□□□□□ -0.49
PTK2-229ENST00000521172 SPOCK2Q92563 424 aa12□□□□□ -0.49
PTK2-229ENST00000521172 MIER1Q8N108 512 aa11.96□□□□□ -0.49
PTK2-229ENST00000521172 PLCD3Q8N3E9 789 aa11.96□□□□□ -0.49
PTK2-229ENST00000521172 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
PTK2-229ENST00000521172 PLCB2Q00722 1185 aa11.86□□□□□ -0.51
PTK2-229ENST00000521172 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
PTK2-229ENST00000521172 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
PTK2-229ENST00000521172 RGL2O15211 777 aa11.79□□□□□ -0.52
PTK2-229ENST00000521172 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
PTK2-229ENST00000521172 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTK2-229ENST00000521172 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
PTK2-229ENST00000521172 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
PTK2-229ENST00000521172 REM2Q8IYK8 340 aaPredicted RBP11.74□□□□□ -0.53
PTK2-229ENST00000521172 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
PTK2-229ENST00000521172 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
PTK2-229ENST00000521172 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
PTK2-229ENST00000521172 NUBP1P53384 320 aa11.69□□□□□ -0.54
PTK2-229ENST00000521172 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
PTK2-229ENST00000521172 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
PTK2-229ENST00000521172 BBXQ8WY36 941 aaPredicted RBP11.66□□□□□ -0.54
PTK2-229ENST00000521172 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
PTK2-229ENST00000521172 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
PTK2-229ENST00000521172 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
PTK2-229ENST00000521172 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
PTK2-229ENST00000521172 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
PTK2-229ENST00000521172 GSE1Q14687 1217 aa11.57□□□□□ -0.56
PTK2-229ENST00000521172 PAXIP1Q6ZW49 1069 aaPredicted RBP11.56□□□□□ -0.56
PTK2-229ENST00000521172 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
PTK2-229ENST00000521172 CHGAP10645 457 aaKnown RBP11.55□□□□□ -0.56
PTK2-229ENST00000521172 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms