RNA–Protein interactions for RNA: ENST00000528400.1

FNTA-207, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 2

Gene FNTA, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-207ENST00000528400 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
FNTA-207ENST00000528400 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
FNTA-207ENST00000528400 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
FNTA-207ENST00000528400 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
FNTA-207ENST00000528400 FOXD1Q16676 465 aa20.09■□□□□ 0.81
FNTA-207ENST00000528400 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
FNTA-207ENST00000528400 MSH5O43196 834 aa19.13■□□□□ 0.65
FNTA-207ENST00000528400 PIAS4Q8N2W9 510 aaPredicted RBP18.76■□□□□ 0.59
FNTA-207ENST00000528400 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
FNTA-207ENST00000528400 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
FNTA-207ENST00000528400 ADRA2BP18089 450 aa18.36■□□□□ 0.53
FNTA-207ENST00000528400 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
FNTA-207ENST00000528400 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
FNTA-207ENST00000528400 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
FNTA-207ENST00000528400 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
FNTA-207ENST00000528400 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
FNTA-207ENST00000528400 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
FNTA-207ENST00000528400 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
FNTA-207ENST00000528400 RNF39Q9H2S5 420 aa16.2■□□□□ 0.18
FNTA-207ENST00000528400 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
FNTA-207ENST00000528400 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
FNTA-207ENST00000528400 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
FNTA-207ENST00000528400 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
FNTA-207ENST00000528400 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
FNTA-207ENST00000528400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
FNTA-207ENST00000528400 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
FNTA-207ENST00000528400 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
FNTA-207ENST00000528400 CAPN15O75808 1086 aa15.04■□□□□ -0
FNTA-207ENST00000528400 POTEHQ6S545 545 aa15.04■□□□□ -0
FNTA-207ENST00000528400 DSG3P32926 999 aa15.01□□□□□ -0.01
FNTA-207ENST00000528400 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
FNTA-207ENST00000528400 APLP2Q06481 763 aa14.85□□□□□ -0.03
FNTA-207ENST00000528400 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
FNTA-207ENST00000528400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
FNTA-207ENST00000528400 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
FNTA-207ENST00000528400 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
FNTA-207ENST00000528400 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
FNTA-207ENST00000528400 ABCB7O75027 752 aa14.59□□□□□ -0.07
FNTA-207ENST00000528400 KCNA4P22459 653 aa14.57□□□□□ -0.08
FNTA-207ENST00000528400 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
FNTA-207ENST00000528400 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
FNTA-207ENST00000528400 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
FNTA-207ENST00000528400 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
FNTA-207ENST00000528400 POLA2Q14181 598 aa14.18□□□□□ -0.14
FNTA-207ENST00000528400 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
FNTA-207ENST00000528400 AKT1S1Q96B36 256 aa14□□□□□ -0.17
FNTA-207ENST00000528400 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
FNTA-207ENST00000528400 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
FNTA-207ENST00000528400 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
FNTA-207ENST00000528400 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
FNTA-207ENST00000528400 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
FNTA-207ENST00000528400 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
FNTA-207ENST00000528400 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
FNTA-207ENST00000528400 HAX1O00165 279 aa13.67□□□□□ -0.22
FNTA-207ENST00000528400 PITPNM1O00562 1244 aa13.64□□□□□ -0.23
FNTA-207ENST00000528400 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
FNTA-207ENST00000528400 ATXN8OSP0DMR3 200 aa13.49□□□□□ -0.25
FNTA-207ENST00000528400 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
FNTA-207ENST00000528400 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
FNTA-207ENST00000528400 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
FNTA-207ENST00000528400 FBLN2P98095 1184 aa13.46□□□□□ -0.25
FNTA-207ENST00000528400 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
FNTA-207ENST00000528400 ZBTB22O15209 634 aa13.33□□□□□ -0.28
FNTA-207ENST00000528400 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
FNTA-207ENST00000528400 EVX2Q03828 476 aa13.31□□□□□ -0.28
FNTA-207ENST00000528400 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
FNTA-207ENST00000528400 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
FNTA-207ENST00000528400 C19orf67A6NJJ6 358 aa13.2□□□□□ -0.3
FNTA-207ENST00000528400 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
FNTA-207ENST00000528400 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
FNTA-207ENST00000528400 GABBR2O75899 941 aa13.1□□□□□ -0.31
FNTA-207ENST00000528400 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
FNTA-207ENST00000528400 LHX8Q68G74 356 aa13.04□□□□□ -0.32
FNTA-207ENST00000528400 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
FNTA-207ENST00000528400 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
FNTA-207ENST00000528400 CLCN6P51797 869 aa12.95□□□□□ -0.34
FNTA-207ENST00000528400 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
FNTA-207ENST00000528400 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
FNTA-207ENST00000528400 DCBLD2Q96PD2 775 aa12.75□□□□□ -0.37
FNTA-207ENST00000528400 POTEIP0CG38 1075 aa12.74□□□□□ -0.37
FNTA-207ENST00000528400 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
FNTA-207ENST00000528400 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
FNTA-207ENST00000528400 ZRANB1Q9UGI0 708 aa12.64□□□□□ -0.39
FNTA-207ENST00000528400 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
FNTA-207ENST00000528400 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
FNTA-207ENST00000528400 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
FNTA-207ENST00000528400 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
FNTA-207ENST00000528400 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
FNTA-207ENST00000528400 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
FNTA-207ENST00000528400 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
FNTA-207ENST00000528400 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
FNTA-207ENST00000528400 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
FNTA-207ENST00000528400 POTEMA6NI47 508 aa12.3□□□□□ -0.44
FNTA-207ENST00000528400 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
FNTA-207ENST00000528400 SLC39A7Q92504 469 aa12.26□□□□□ -0.45
FNTA-207ENST00000528400 C7P10643 843 aa12.25□□□□□ -0.45
FNTA-207ENST00000528400 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
FNTA-207ENST00000528400 ASTLQ6HA08 431 aaPredicted RBP12.25□□□□□ -0.45
FNTA-207ENST00000528400 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
FNTA-207ENST00000528400 POTEGQ6S5H5 508 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms