RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-204ENST00000461044 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
FXR1-204ENST00000461044 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
FXR1-204ENST00000461044 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
FXR1-204ENST00000461044 SENP3Q9H4L4 574 aaPredicted RBP13.75□□□□□ -0.21
FXR1-204ENST00000461044 FOXD1Q16676 465 aa12.87□□□□□ -0.35
FXR1-204ENST00000461044 PLPPR3Q6T4P5 718 aa12.67□□□□□ -0.38
FXR1-204ENST00000461044 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
FXR1-204ENST00000461044 ADRA2BP18089 450 aa12.27□□□□□ -0.45
FXR1-204ENST00000461044 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.49
FXR1-204ENST00000461044 MSH5O43196 834 aa11.82□□□□□ -0.52
FXR1-204ENST00000461044 MAPK8IP2Q13387 824 aaPredicted RBP11.2□□□□□ -0.62
FXR1-204ENST00000461044 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
FXR1-204ENST00000461044 SCAF1Q9H7N4 1312 aaKnown RBP11.09□□□□□ -0.63
FXR1-204ENST00000461044 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
FXR1-204ENST00000461044 DMRT2Q9Y5R5 561 aa11□□□□□ -0.65
FXR1-204ENST00000461044 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
FXR1-204ENST00000461044 KCNA4P22459 653 aa10.8□□□□□ -0.68
FXR1-204ENST00000461044 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.69
FXR1-204ENST00000461044 HOXD11P31277 338 aaPredicted RBP10.74□□□□□ -0.69
FXR1-204ENST00000461044 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
FXR1-204ENST00000461044 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
FXR1-204ENST00000461044 DCAF8L1A6NGE4 600 aa10.45□□□□□ -0.74
FXR1-204ENST00000461044 DNAJC5BQ9UF47 199 aa10.44□□□□□ -0.74
FXR1-204ENST00000461044 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
FXR1-204ENST00000461044 SLC4A2P04920 1241 aa10.19□□□□□ -0.78
FXR1-204ENST00000461044 RNF39Q9H2S5 420 aa10.19□□□□□ -0.78
FXR1-204ENST00000461044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.786e-6■□□□□ 8.3
FXR1-204ENST00000461044 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
FXR1-204ENST00000461044 C1QBPQ07021 282 aaKnown RBP10□□□□□ -0.81
FXR1-204ENST00000461044 ZBTB22O15209 634 aa9.99□□□□□ -0.81
FXR1-204ENST00000461044 CACNB1Q02641 598 aaPredicted RBP9.96□□□□□ -0.82
FXR1-204ENST00000461044 FOXD4L1Q9NU39 408 aa9.92□□□□□ -0.82
FXR1-204ENST00000461044 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
FXR1-204ENST00000461044 SPINK5Q9NQ38 1064 aaPredicted RBP9.82□□□□□ -0.84
FXR1-204ENST00000461044 CSRNP3Q8WYN3 585 aa9.79□□□□□ -0.84
FXR1-204ENST00000461044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
FXR1-204ENST00000461044 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
FXR1-204ENST00000461044 EHMT2Q96KQ7 1210 aa9.75□□□□□ -0.85
FXR1-204ENST00000461044 SAMD1Q6SPF0 538 aaPredicted RBP9.74□□□□□ -0.85
FXR1-204ENST00000461044 CAPN15O75808 1086 aa9.71□□□□□ -0.86
FXR1-204ENST00000461044 ATF5Q9Y2D1 282 aaPredicted RBP9.7□□□□□ -0.86
FXR1-204ENST00000461044 DSG3P32926 999 aa9.65□□□□□ -0.86
FXR1-204ENST00000461044 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
FXR1-204ENST00000461044 APLP2Q06481 763 aa9.64□□□□□ -0.87
FXR1-204ENST00000461044 ZNF219Q9P2Y4 722 aaPredicted RBP9.6□□□□□ -0.87
FXR1-204ENST00000461044 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
FXR1-204ENST00000461044 ABCB7O75027 752 aa9.55□□□□□ -0.88
FXR1-204ENST00000461044 POLA2Q14181 598 aa9.48□□□□□ -0.89
FXR1-204ENST00000461044 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
FXR1-204ENST00000461044 ZBTB12Q9Y330 459 aaPredicted RBP9.23□□□□□ -0.93
FXR1-204ENST00000461044 FBLN2P98095 1184 aa9.15□□□□□ -0.94
FXR1-204ENST00000461044 OSCARQ8IYS5 282 aa9.15□□□□□ -0.94
FXR1-204ENST00000461044 RBM42Q9BTD8 480 aaKnown RBP9.08□□□□□ -0.96
FXR1-204ENST00000461044 SPDYE2BA6NHP3 402 aa9.02□□□□□ -0.97
FXR1-204ENST00000461044 SPDYE6P0CI01 402 aa9.02□□□□□ -0.97
FXR1-204ENST00000461044 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.97
FXR1-204ENST00000461044 AKT1S1Q96B36 256 aa9□□□□□ -0.97
FXR1-204ENST00000461044 SSUH2Q9Y2M2 353 aa8.99□□□□□ -0.97
FXR1-204ENST00000461044 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
FXR1-204ENST00000461044 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
FXR1-204ENST00000461044 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
FXR1-204ENST00000461044 PABPN1Q86U42 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
FXR1-204ENST00000461044 PITPNM1O00562 1244 aa8.85□□□□□ -0.99
FXR1-204ENST00000461044 CHRDL2Q6WN34 429 aa8.83□□□□□ -1
FXR1-204ENST00000461044 PROM2Q8N271 834 aa8.81□□□□□ -1
FXR1-204ENST00000461044 FKBP8Q14318 412 aa8.78□□□□□ -1
FXR1-204ENST00000461044 SPDYE1Q8NFV5 336 aaPredicted RBP8.77□□□□□ -1.01
FXR1-204ENST00000461044 CLEC11AQ9Y240 323 aa8.74□□□□□ -1.01
FXR1-204ENST00000461044 FXR2P51116 673 aaKnown RBP eCLIP8.73□□□□□ -1.01
FXR1-204ENST00000461044 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
FXR1-204ENST00000461044 POTEHQ6S545 545 aa8.72□□□□□ -1.01
FXR1-204ENST00000461044 PRR29P0C7W0 189 aa8.64□□□□□ -1.03
FXR1-204ENST00000461044 STAG3Q9UJ98 1225 aa8.63□□□□□ -1.03
FXR1-204ENST00000461044 PRKAR2AP13861 404 aaKnown RBP8.6□□□□□ -1.03
FXR1-204ENST00000461044 CHADLQ6NUI6 762 aa8.6□□□□□ -1.03
FXR1-204ENST00000461044 CREBZFQ9NS37 354 aa8.58□□□□□ -1.04
FXR1-204ENST00000461044 MNX1P50219 401 aaPredicted RBP8.51□□□□□ -1.05
FXR1-204ENST00000461044 FARP1Q9Y4F1 1045 aaPredicted RBP8.49□□□□□ -1.05
FXR1-204ENST00000461044 EVX2Q03828 476 aa8.47□□□□□ -1.05
FXR1-204ENST00000461044 C19orf67A6NJJ6 358 aa8.44□□□□□ -1.06
FXR1-204ENST00000461044 MIER1Q8N108 512 aa8.44□□□□□ -1.06
FXR1-204ENST00000461044 FBXO3Q9UK99 471 aa8.44□□□□□ -1.06
FXR1-204ENST00000461044 HAX1O00165 279 aa8.42□□□□□ -1.06
FXR1-204ENST00000461044 VASPP50552 380 aaPredicted RBP8.39□□□□□ -1.07
FXR1-204ENST00000461044 PLCD3Q8N3E9 789 aa8.38□□□□□ -1.07
FXR1-204ENST00000461044 NPM1P06748 294 aaKnown RBP eCLIP8.33□□□□□ -1.08
FXR1-204ENST00000461044 CD44P16070 742 aaKnown RBP8.33□□□□□ -1.08
FXR1-204ENST00000461044 IFNLR1Q8IU57 520 aaPredicted RBP8.33□□□□□ -1.08
FXR1-204ENST00000461044 NUBP1P53384 320 aa8.31□□□□□ -1.08
FXR1-204ENST00000461044 SP7Q8TDD2 431 aaPredicted RBP8.31□□□□□ -1.08
FXR1-204ENST00000461044 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
FXR1-204ENST00000461044 RASEFQ8IZ41 740 aa8.29□□□□□ -1.08
FXR1-204ENST00000461044 ZRANB1Q9UGI0 708 aa8.27□□□□□ -1.09
FXR1-204ENST00000461044 ZBTB47Q9UFB7 747 aaPredicted RBP8.25□□□□□ -1.09
FXR1-204ENST00000461044 ZNF579Q8NAF0 562 aaKnown RBP8.24□□□□□ -1.09
FXR1-204ENST00000461044 GABBR2O75899 941 aa8.23□□□□□ -1.09
FXR1-204ENST00000461044 KLHL34Q8N239 644 aa8.23□□□□□ -1.09
FXR1-204ENST00000461044 TSPYL2Q9H2G4 693 aaPredicted RBP8.23□□□□□ -1.09
FXR1-204ENST00000461044 CCDC61Q9Y6R9 512 aa8.22□□□□□ -1.09
FXR1-204ENST00000461044 PHF12Q96QT6 1004 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms