RNA–Protein interactions for RNA: ENST00000615949.6

ZNF248-209, Transcript of zinc finger protein 248, humanhuman

TSL 5 BASIC

Gene ZNF248, Length 518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-209ENST00000615949 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
ZNF248-209ENST00000615949 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
ZNF248-209ENST00000615949 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
ZNF248-209ENST00000615949 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
ZNF248-209ENST00000615949 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
ZNF248-209ENST00000615949 FOXD1Q16676 465 aa15.42■□□□□ 0.06
ZNF248-209ENST00000615949 ADRA2BP18089 450 aa15.18■□□□□ 0.02
ZNF248-209ENST00000615949 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
ZNF248-209ENST00000615949 PIAS4Q8N2W9 510 aaPredicted RBP14.72□□□□□ -0.05
ZNF248-209ENST00000615949 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
ZNF248-209ENST00000615949 KCNA4P22459 653 aa14.52□□□□□ -0.09
ZNF248-209ENST00000615949 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
ZNF248-209ENST00000615949 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
ZNF248-209ENST00000615949 MSH5O43196 834 aa14.21□□□□□ -0.13
ZNF248-209ENST00000615949 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
ZNF248-209ENST00000615949 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
ZNF248-209ENST00000615949 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
ZNF248-209ENST00000615949 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
ZNF248-209ENST00000615949 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
ZNF248-209ENST00000615949 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
ZNF248-209ENST00000615949 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
ZNF248-209ENST00000615949 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.24
ZNF248-209ENST00000615949 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
ZNF248-209ENST00000615949 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
ZNF248-209ENST00000615949 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
ZNF248-209ENST00000615949 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
ZNF248-209ENST00000615949 ZBTB22O15209 634 aa13.29□□□□□ -0.28
ZNF248-209ENST00000615949 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
ZNF248-209ENST00000615949 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
ZNF248-209ENST00000615949 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
ZNF248-209ENST00000615949 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
ZNF248-209ENST00000615949 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
ZNF248-209ENST00000615949 CCDC180Q9P1Z9 1646 aa12.8□□□□□ -0.36
ZNF248-209ENST00000615949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.366e-8■□□□□ 10.4
ZNF248-209ENST00000615949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
ZNF248-209ENST00000615949 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
ZNF248-209ENST00000615949 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
ZNF248-209ENST00000615949 APLP2Q06481 763 aa12.57□□□□□ -0.4
ZNF248-209ENST00000615949 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
ZNF248-209ENST00000615949 FKBP8Q14318 412 aa12.39□□□□□ -0.43
ZNF248-209ENST00000615949 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
ZNF248-209ENST00000615949 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
ZNF248-209ENST00000615949 ABCC9O60706 1549 aa12.23□□□□□ -0.45
ZNF248-209ENST00000615949 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
ZNF248-209ENST00000615949 ZCCHC6Q5VYS8 1495 aaKnown RBP12.17□□□□□ -0.46
ZNF248-209ENST00000615949 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
ZNF248-209ENST00000615949 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
ZNF248-209ENST00000615949 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
ZNF248-209ENST00000615949 FBLN2P98095 1184 aa12.08□□□□□ -0.48
ZNF248-209ENST00000615949 DCAF1Q9Y4B6 1507 aa12.07□□□□□ -0.48
ZNF248-209ENST00000615949 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
ZNF248-209ENST00000615949 CAPN15O75808 1086 aa12.03□□□□□ -0.48
ZNF248-209ENST00000615949 MYO15BQ96JP2 1530 aa12.02□□□□□ -0.48
ZNF248-209ENST00000615949 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
ZNF248-209ENST00000615949 FBXO3Q9UK99 471 aa12□□□□□ -0.49
ZNF248-209ENST00000615949 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
ZNF248-209ENST00000615949 ZBTB12Q9Y330 459 aaPredicted RBP11.99□□□□□ -0.49
ZNF248-209ENST00000615949 NACADO15069 1562 aa11.99□□□□□ -0.49
ZNF248-209ENST00000615949 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
ZNF248-209ENST00000615949 POLA2Q14181 598 aa11.98□□□□□ -0.49
ZNF248-209ENST00000615949 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
ZNF248-209ENST00000615949 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
ZNF248-209ENST00000615949 PROM2Q8N271 834 aa11.81□□□□□ -0.52
ZNF248-209ENST00000615949 ABCB7O75027 752 aa11.75□□□□□ -0.53
ZNF248-209ENST00000615949 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
ZNF248-209ENST00000615949 SHROOM4Q9ULL8 1493 aa11.69□□□□□ -0.54
ZNF248-209ENST00000615949 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
ZNF248-209ENST00000615949 DSG3P32926 999 aa11.68□□□□□ -0.54
ZNF248-209ENST00000615949 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
ZNF248-209ENST00000615949 SPDYE2BA6NHP3 402 aa11.62□□□□□ -0.55
ZNF248-209ENST00000615949 SPDYE6P0CI01 402 aa11.62□□□□□ -0.55
ZNF248-209ENST00000615949 SPDYE2Q495Y8 402 aa11.62□□□□□ -0.55
ZNF248-209ENST00000615949 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
ZNF248-209ENST00000615949 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
ZNF248-209ENST00000615949 UNC13AQ9UPW8 1703 aa11.57□□□□□ -0.56
ZNF248-209ENST00000615949 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
ZNF248-209ENST00000615949 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
ZNF248-209ENST00000615949 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
ZNF248-209ENST00000615949 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
ZNF248-209ENST00000615949 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
ZNF248-209ENST00000615949 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
ZNF248-209ENST00000615949 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
ZNF248-209ENST00000615949 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
ZNF248-209ENST00000615949 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
ZNF248-209ENST00000615949 SPOCK2Q92563 424 aa11.4□□□□□ -0.58
ZNF248-209ENST00000615949 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
ZNF248-209ENST00000615949 MIER1Q8N108 512 aa11.34□□□□□ -0.59
ZNF248-209ENST00000615949 CECR2Q9BXF3 1484 aa11.28□□□□□ -0.6
ZNF248-209ENST00000615949 PKD2Q13563 968 aa11.28□□□□□ -0.6
ZNF248-209ENST00000615949 RBM42Q9BTD8 480 aaKnown RBP11.28□□□□□ -0.6
ZNF248-209ENST00000615949 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
ZNF248-209ENST00000615949 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
ZNF248-209ENST00000615949 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
ZNF248-209ENST00000615949 SMARCA4P51532 1647 aa11.21□□□□□ -0.61
ZNF248-209ENST00000615949 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.61
ZNF248-209ENST00000615949 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
ZNF248-209ENST00000615949 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
ZNF248-209ENST00000615949 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
ZNF248-209ENST00000615949 EIF4G1Q04637 1599 aaKnown RBP11.19□□□□□ -0.62
ZNF248-209ENST00000615949 SPDYE1Q8NFV5 336 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms