RNA–Protein interactions for RNA: ENST00000524783.1

AMBRA1-203, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 427 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-203ENST00000524783 AEBP2Q6ZN18 517 aaPredicted RBP17.02■□□□□ 0.32
AMBRA1-203ENST00000524783 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
AMBRA1-203ENST00000524783 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-203ENST00000524783 PHF23Q9BUL5 403 aaPredicted RBP14.41□□□□□ -0.1
AMBRA1-203ENST00000524783 FOXD1Q16676 465 aa13.54□□□□□ -0.24
AMBRA1-203ENST00000524783 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
AMBRA1-203ENST00000524783 MSH5O43196 834 aa12.72□□□□□ -0.37
AMBRA1-203ENST00000524783 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
AMBRA1-203ENST00000524783 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
AMBRA1-203ENST00000524783 ADRA2BP18089 450 aa12.7□□□□□ -0.38
AMBRA1-203ENST00000524783 POTEDQ86YR6 584 aa12.11□□□□□ -0.47
AMBRA1-203ENST00000524783 KCNA4P22459 653 aa12.07□□□□□ -0.48
AMBRA1-203ENST00000524783 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
AMBRA1-203ENST00000524783 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
AMBRA1-203ENST00000524783 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
AMBRA1-203ENST00000524783 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-203ENST00000524783 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
AMBRA1-203ENST00000524783 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
AMBRA1-203ENST00000524783 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-203ENST00000524783 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
AMBRA1-203ENST00000524783 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
AMBRA1-203ENST00000524783 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
AMBRA1-203ENST00000524783 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-203ENST00000524783 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-203ENST00000524783 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
AMBRA1-203ENST00000524783 ZBTB22O15209 634 aa11.1□□□□□ -0.63
AMBRA1-203ENST00000524783 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
AMBRA1-203ENST00000524783 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
AMBRA1-203ENST00000524783 CACNB1Q02641 598 aaPredicted RBP10.82□□□□□ -0.68
AMBRA1-203ENST00000524783 RNF39Q9H2S5 420 aa10.8□□□□□ -0.68
AMBRA1-203ENST00000524783 SLC4A2P04920 1241 aa10.72□□□□□ -0.69
AMBRA1-203ENST00000524783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.72□□□□□ -0.69
AMBRA1-203ENST00000524783 C1QBPQ07021 282 aaKnown RBP10.71□□□□□ -0.69
AMBRA1-203ENST00000524783 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
AMBRA1-203ENST00000524783 ATXN8OSP0DMR3 200 aa10.55□□□□□ -0.72
AMBRA1-203ENST00000524783 U3KPZ7 1027 aaPredicted RBP10.44□□□□□ -0.74
AMBRA1-203ENST00000524783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.32□□□□□ -0.76
AMBRA1-203ENST00000524783 APLP2Q06481 763 aa10.32□□□□□ -0.76
AMBRA1-203ENST00000524783 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
AMBRA1-203ENST00000524783 FKBP8Q14318 412 aa10.3□□□□□ -0.76
AMBRA1-203ENST00000524783 CAPN15O75808 1086 aa10.28□□□□□ -0.76
AMBRA1-203ENST00000524783 SAMD1Q6SPF0 538 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-203ENST00000524783 ATF5Q9Y2D1 282 aaPredicted RBP10.27□□□□□ -0.77
AMBRA1-203ENST00000524783 SPINK5Q9NQ38 1064 aaPredicted RBP10.23□□□□□ -0.77
AMBRA1-203ENST00000524783 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-203ENST00000524783 RTN4Q9NQC3 1192 aaKnown RBP10.17□□□□□ -0.78
AMBRA1-203ENST00000524783 ZNF219Q9P2Y4 722 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-203ENST00000524783 DSG3P32926 999 aa10.15□□□□□ -0.78
AMBRA1-203ENST00000524783 TRHP20396 242 aaPredicted RBP10.13□□□□□ -0.79
AMBRA1-203ENST00000524783 ABCB7O75027 752 aa10.01□□□□□ -0.81
AMBRA1-203ENST00000524783 SLC24A1O60721 1099 aa9.92□□□□□ -0.82
AMBRA1-203ENST00000524783 POLA2Q14181 598 aa9.89□□□□□ -0.83
AMBRA1-203ENST00000524783 SPDYE4A6NLX3 237 aa9.86□□□□□ -0.83
AMBRA1-203ENST00000524783 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
AMBRA1-203ENST00000524783 FBLN2P98095 1184 aa9.83□□□□□ -0.84
AMBRA1-203ENST00000524783 FBXO3Q9UK99 471 aa9.81□□□□□ -0.84
AMBRA1-203ENST00000524783 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
AMBRA1-203ENST00000524783 RBM42Q9BTD8 480 aaKnown RBP9.78□□□□□ -0.84
AMBRA1-203ENST00000524783 PROM2Q8N271 834 aa9.74□□□□□ -0.85
AMBRA1-203ENST00000524783 VASPP50552 380 aaPredicted RBP9.66□□□□□ -0.86
AMBRA1-203ENST00000524783 IFNLR1Q8IU57 520 aaPredicted RBP9.56□□□□□ -0.88
AMBRA1-203ENST00000524783 POTEHQ6S545 545 aa9.55□□□□□ -0.88
AMBRA1-203ENST00000524783 OSCARQ8IYS5 282 aa9.55□□□□□ -0.88
AMBRA1-203ENST00000524783 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
AMBRA1-203ENST00000524783 ZNF692Q9BU19 519 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-203ENST00000524783 SPDYE2BA6NHP3 402 aa9.45□□□□□ -0.9
AMBRA1-203ENST00000524783 SPDYE6P0CI01 402 aa9.45□□□□□ -0.9
AMBRA1-203ENST00000524783 SPDYE2Q495Y8 402 aa9.45□□□□□ -0.9
AMBRA1-203ENST00000524783 CHRDL2Q6WN34 429 aa9.45□□□□□ -0.9
AMBRA1-203ENST00000524783 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
AMBRA1-203ENST00000524783 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
AMBRA1-203ENST00000524783 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
AMBRA1-203ENST00000524783 PKD2Q13563 968 aa9.41□□□□□ -0.9
AMBRA1-203ENST00000524783 KLHL34Q8N239 644 aa9.41□□□□□ -0.9
AMBRA1-203ENST00000524783 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
AMBRA1-203ENST00000524783 PLCB2Q00722 1185 aa9.39□□□□□ -0.91
AMBRA1-203ENST00000524783 SPOCK2Q92563 424 aa9.39□□□□□ -0.91
AMBRA1-203ENST00000524783 PABPN1Q86U42 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
AMBRA1-203ENST00000524783 PLCD3Q8N3E9 789 aa9.35□□□□□ -0.91
AMBRA1-203ENST00000524783 MIER1Q8N108 512 aa9.31□□□□□ -0.92
AMBRA1-203ENST00000524783 PITPNM1O00562 1244 aa9.3□□□□□ -0.92
AMBRA1-203ENST00000524783 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
AMBRA1-203ENST00000524783 HAP1P54257 671 aaPredicted RBP9.27□□□□□ -0.93
AMBRA1-203ENST00000524783 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
AMBRA1-203ENST00000524783 PLEKHG5O94827 1062 aa9.23□□□□□ -0.93
AMBRA1-203ENST00000524783 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
AMBRA1-203ENST00000524783 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.94
AMBRA1-203ENST00000524783 CLEC11AQ9Y240 323 aa9.21□□□□□ -0.94
AMBRA1-203ENST00000524783 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
AMBRA1-203ENST00000524783 BBXQ8WY36 941 aaPredicted RBP9.19□□□□□ -0.94
AMBRA1-203ENST00000524783 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.19□□□□□ -0.94
AMBRA1-203ENST00000524783 RGL2O15211 777 aa9.17□□□□□ -0.94
AMBRA1-203ENST00000524783 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
AMBRA1-203ENST00000524783 CIZ1Q9ULV3 898 aaPredicted RBP9.17□□□□□ -0.94
AMBRA1-203ENST00000524783 VSIG10Q8N0Z9 540 aa9.13□□□□□ -0.95
AMBRA1-203ENST00000524783 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
AMBRA1-203ENST00000524783 PRR29P0C7W0 189 aa9.1□□□□□ -0.95
AMBRA1-203ENST00000524783 TRIM41Q8WV44 630 aa9.09□□□□□ -0.95
AMBRA1-203ENST00000524783 CFAP44Q96MT7 982 aa9.09□□□□□ -0.95
AMBRA1-203ENST00000524783 HAX1O00165 279 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms