RNA–Protein interactions for RNA: ENST00000395874.2

ZNF248-205, Transcript of zinc finger protein 248, humanhuman

TSL 3

Gene ZNF248, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-205ENST00000395874 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
ZNF248-205ENST00000395874 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
ZNF248-205ENST00000395874 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
ZNF248-205ENST00000395874 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
ZNF248-205ENST00000395874 FOXD1Q16676 465 aa21.84■■□□□ 1.09
ZNF248-205ENST00000395874 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
ZNF248-205ENST00000395874 ADRA2BP18089 450 aa20.7■□□□□ 0.9
ZNF248-205ENST00000395874 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
ZNF248-205ENST00000395874 PIAS4Q8N2W9 510 aaPredicted RBP20.64■□□□□ 0.89
ZNF248-205ENST00000395874 MSH5O43196 834 aa20.49■□□□□ 0.87
ZNF248-205ENST00000395874 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
ZNF248-205ENST00000395874 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
ZNF248-205ENST00000395874 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
ZNF248-205ENST00000395874 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
ZNF248-205ENST00000395874 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
ZNF248-205ENST00000395874 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
ZNF248-205ENST00000395874 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
ZNF248-205ENST00000395874 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
ZNF248-205ENST00000395874 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
ZNF248-205ENST00000395874 KCNA4P22459 653 aa18.15■□□□□ 0.5
ZNF248-205ENST00000395874 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
ZNF248-205ENST00000395874 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
ZNF248-205ENST00000395874 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
ZNF248-205ENST00000395874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.39
ZNF248-205ENST00000395874 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
ZNF248-205ENST00000395874 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
ZNF248-205ENST00000395874 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
ZNF248-205ENST00000395874 CACNB1Q02641 598 aaPredicted RBP17.21■□□□□ 0.35
ZNF248-205ENST00000395874 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
ZNF248-205ENST00000395874 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
ZNF248-205ENST00000395874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
ZNF248-205ENST00000395874 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
ZNF248-205ENST00000395874 APLP2Q06481 763 aa16.98■□□□□ 0.31
ZNF248-205ENST00000395874 FOXD4L1Q9NU39 408 aa16.93■□□□□ 0.3
ZNF248-205ENST00000395874 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
ZNF248-205ENST00000395874 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
ZNF248-205ENST00000395874 CAPN15O75808 1086 aa16.71■□□□□ 0.27
ZNF248-205ENST00000395874 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
ZNF248-205ENST00000395874 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
ZNF248-205ENST00000395874 ZBTB22O15209 634 aa16.6■□□□□ 0.25
ZNF248-205ENST00000395874 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
ZNF248-205ENST00000395874 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
ZNF248-205ENST00000395874 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
ZNF248-205ENST00000395874 DSG3P32926 999 aa16.42■□□□□ 0.22
ZNF248-205ENST00000395874 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
ZNF248-205ENST00000395874 ABCB7O75027 752 aa16.27■□□□□ 0.2
ZNF248-205ENST00000395874 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
ZNF248-205ENST00000395874 POLA2Q14181 598 aa16.16■□□□□ 0.18
ZNF248-205ENST00000395874 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
ZNF248-205ENST00000395874 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
ZNF248-205ENST00000395874 FBLN2P98095 1184 aa15.87■□□□□ 0.13
ZNF248-205ENST00000395874 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
ZNF248-205ENST00000395874 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
ZNF248-205ENST00000395874 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
ZNF248-205ENST00000395874 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
ZNF248-205ENST00000395874 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
ZNF248-205ENST00000395874 AKT1S1Q96B36 256 aa15.52■□□□□ 0.08
ZNF248-205ENST00000395874 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
ZNF248-205ENST00000395874 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
ZNF248-205ENST00000395874 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
ZNF248-205ENST00000395874 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
ZNF248-205ENST00000395874 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
ZNF248-205ENST00000395874 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
ZNF248-205ENST00000395874 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
ZNF248-205ENST00000395874 PITPNM1O00562 1244 aa15.1■□□□□ 0.01
ZNF248-205ENST00000395874 CLEC11AQ9Y240 323 aa15.04■□□□□ -0
ZNF248-205ENST00000395874 POTEHQ6S545 545 aa15.03■□□□□ -0
ZNF248-205ENST00000395874 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
ZNF248-205ENST00000395874 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
ZNF248-205ENST00000395874 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
ZNF248-205ENST00000395874 FKBP8Q14318 412 aa14.88□□□□□ -0.03
ZNF248-205ENST00000395874 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
ZNF248-205ENST00000395874 PROM2Q8N271 834 aa14.83□□□□□ -0.04
ZNF248-205ENST00000395874 PRKAR2AP13861 404 aaKnown RBP14.75□□□□□ -0.05
ZNF248-205ENST00000395874 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
ZNF248-205ENST00000395874 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
ZNF248-205ENST00000395874 CHADLQ6NUI6 762 aa14.58□□□□□ -0.08
ZNF248-205ENST00000395874 HAX1O00165 279 aa14.55□□□□□ -0.08
ZNF248-205ENST00000395874 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
ZNF248-205ENST00000395874 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
ZNF248-205ENST00000395874 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
ZNF248-205ENST00000395874 PLCD3Q8N3E9 789 aa14.45□□□□□ -0.1
ZNF248-205ENST00000395874 MIER1Q8N108 512 aa14.44□□□□□ -0.1
ZNF248-205ENST00000395874 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
ZNF248-205ENST00000395874 C19orf67A6NJJ6 358 aa14.39□□□□□ -0.11
ZNF248-205ENST00000395874 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
ZNF248-205ENST00000395874 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
ZNF248-205ENST00000395874 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
ZNF248-205ENST00000395874 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
ZNF248-205ENST00000395874 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
ZNF248-205ENST00000395874 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
ZNF248-205ENST00000395874 CLCN6P51797 869 aa14.26□□□□□ -0.13
ZNF248-205ENST00000395874 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
ZNF248-205ENST00000395874 EVX2Q03828 476 aa14.16□□□□□ -0.14
ZNF248-205ENST00000395874 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
ZNF248-205ENST00000395874 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
ZNF248-205ENST00000395874 FAM212AQ96EL1 285 aa14.1□□□□□ -0.15
ZNF248-205ENST00000395874 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
ZNF248-205ENST00000395874 GABBR2O75899 941 aa14.03□□□□□ -0.16
ZNF248-205ENST00000395874 NUBP1P53384 320 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms