Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 SAMMSON-203ENST00000641005 2168 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 PPM1K-210ENST00000608933 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 CUBNP1-201ENST00000412710 1790 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC9.1□□□□□ -0.95
POLR2AP24928 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
POLR2AP24928 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC9.1□□□□□ -0.95
POLR2AP24928 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
POLR2AP24928 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 AL157698.1-201ENST00000415190 1011 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 AC114402.2-201ENST00000432760 643 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC9.1□□□□□ -0.95
POLR2AP24928 AC009153.1-201ENST00000485799 496 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 SCARNA11.1-201ENST00000516918 132 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC9.1□□□□□ -0.95
POLR2AP24928 AP003084.1-201ENST00000524828 742 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 uc_338.37-201ENST00000620113 186 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
POLR2AP24928 AC093616.1-201ENST00000427434 2095 ntBASIC9.1□□□□□ -0.95
POLR2AP24928 NF1P7-201ENST00000612076 1530 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
POLR2AP24928 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC9.09□□□□□ -0.95
POLR2AP24928 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC9.09□□□□□ -0.95
POLR2AP24928 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
POLR2AP24928 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
POLR2AP24928 AL391380.1-201ENST00000439300 1432 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 AC125232.1-201ENST00000452554 1408 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
POLR2AP24928 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC9.09□□□□□ -0.95
POLR2AP24928 RBMX2P2-201ENST00000257020 946 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
POLR2AP24928 SRI-202ENST00000394641 653 ntTSL 2 BASIC9.09□□□□□ -0.95
POLR2AP24928 EIF4A1P13-201ENST00000415667 230 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC9.09□□□□□ -0.95
POLR2AP24928 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC9.09□□□□□ -0.95
POLR2AP24928 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC9.09□□□□□ -0.95
POLR2AP24928 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC9.09□□□□□ -0.95
POLR2AP24928 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC9.09□□□□□ -0.95
POLR2AP24928 PHBP2-201ENST00000532859 806 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 AC107958.1-201ENST00000556576 290 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC9.09□□□□□ -0.95
POLR2AP24928 OR7E19P-202ENST00000589942 844 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC9.09□□□□□ -0.95
POLR2AP24928 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC9.09□□□□□ -0.95
POLR2AP24928 HERC2P3-206ENST00000429257 4088 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC9.09□□□□□ -0.95
POLR2AP24928 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC9.09□□□□□ -0.95
POLR2AP24928 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
POLR2AP24928 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC9.09□□□□□ -0.95
POLR2AP24928 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC9.09□□□□□ -0.95
POLR2AP24928 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
POLR2AP24928 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
POLR2AP24928 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
POLR2AP24928 AC108099.1-201ENST00000564402 3258 ntBASIC9.09□□□□□ -0.95
POLR2AP24928 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
POLR2AP24928 FAM71F2-205ENST00000641605 5749 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 SNORA70I-201ENST00000384544 135 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 ALDH7A1P4-201ENST00000412255 178 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 OR52N3P-201ENST00000413417 934 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC9.08□□□□□ -0.96
POLR2AP24928 AF274573.1-201ENST00000430535 494 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC9.08□□□□□ -0.96
POLR2AP24928 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC9.08□□□□□ -0.96
POLR2AP24928 HNRNPA1P17-201ENST00000496620 924 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC9.08□□□□□ -0.96
POLR2AP24928 SNX18P27-201ENST00000523611 779 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 RN7SL32P-201ENST00000580514 281 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 IGKV2OR2-7-201ENST00000604652 304 ntBASIC9.08□□□□□ -0.96
POLR2AP24928 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
POLR2AP24928 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
POLR2AP24928 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC9.08□□□□□ -0.96
POLR2AP24928 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
POLR2AP24928 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC9.08□□□□□ -0.96
POLR2AP24928 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
POLR2AP24928 AC093768.1-201ENST00000505987 2173 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms