RNA–Protein interactions for RNA: ENST00000519557.1

LINC01603-202, Transcript of long intergenic non-protein coding RNA 1603, humanhuman

TSL 3 BASIC

Gene LINC01603, Length 712 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01603-202ENST00000519557 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
LINC01603-202ENST00000519557 CHIC1Q5VXU3 224 aa20.17■□□□□ 0.82
LINC01603-202ENST00000519557 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
LINC01603-202ENST00000519557 NISCHQ9Y2I1 1504 aa17.78■□□□□ 0.44
LINC01603-202ENST00000519557 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
LINC01603-202ENST00000519557 FOXD1Q16676 465 aa16.53■□□□□ 0.24
LINC01603-202ENST00000519557 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
LINC01603-202ENST00000519557 CCDC180Q9P1Z9 1646 aa15.81■□□□□ 0.12
LINC01603-202ENST00000519557 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
LINC01603-202ENST00000519557 ABCC9O60706 1549 aa15.63■□□□□ 0.09
LINC01603-202ENST00000519557 ADRA2BP18089 450 aa15.63■□□□□ 0.09
LINC01603-202ENST00000519557 PIAS4Q8N2W9 510 aaPredicted RBP15.52■□□□□ 0.08
LINC01603-202ENST00000519557 MSH5O43196 834 aa15.39■□□□□ 0.05
LINC01603-202ENST00000519557 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
LINC01603-202ENST00000519557 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
LINC01603-202ENST00000519557 NACADO15069 1562 aa14.9□□□□□ -0.02
LINC01603-202ENST00000519557 ZCCHC6Q5VYS8 1495 aaKnown RBP14.79□□□□□ -0.04
LINC01603-202ENST00000519557 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
LINC01603-202ENST00000519557 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
LINC01603-202ENST00000519557 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
LINC01603-202ENST00000519557 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
LINC01603-202ENST00000519557 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
LINC01603-202ENST00000519557 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
LINC01603-202ENST00000519557 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
LINC01603-202ENST00000519557 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
LINC01603-202ENST00000519557 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
LINC01603-202ENST00000519557 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
LINC01603-202ENST00000519557 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
LINC01603-202ENST00000519557 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
LINC01603-202ENST00000519557 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
LINC01603-202ENST00000519557 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
LINC01603-202ENST00000519557 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
LINC01603-202ENST00000519557 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
LINC01603-202ENST00000519557 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
LINC01603-202ENST00000519557 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
LINC01603-202ENST00000519557 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
LINC01603-202ENST00000519557 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
LINC01603-202ENST00000519557 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
LINC01603-202ENST00000519557 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
LINC01603-202ENST00000519557 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
LINC01603-202ENST00000519557 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
LINC01603-202ENST00000519557 MROH2BQ7Z745 1585 aa13.73□□□□□ -0.21
LINC01603-202ENST00000519557 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
LINC01603-202ENST00000519557 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
LINC01603-202ENST00000519557 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
LINC01603-202ENST00000519557 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
LINC01603-202ENST00000519557 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
LINC01603-202ENST00000519557 KCNA4P22459 653 aa13.62□□□□□ -0.23
LINC01603-202ENST00000519557 WIZO95785 1651 aa13.57□□□□□ -0.24
LINC01603-202ENST00000519557 RSF1Q96T23 1441 aaPredicted RBP13.54□□□□□ -0.24
LINC01603-202ENST00000519557 NESP48681 1621 aa13.52□□□□□ -0.25
LINC01603-202ENST00000519557 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
LINC01603-202ENST00000519557 ERCC6Q03468 1493 aa13.46□□□□□ -0.25
LINC01603-202ENST00000519557 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
LINC01603-202ENST00000519557 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
LINC01603-202ENST00000519557 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
LINC01603-202ENST00000519557 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
LINC01603-202ENST00000519557 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
LINC01603-202ENST00000519557 CUX2O14529 1486 aa13.32□□□□□ -0.28
LINC01603-202ENST00000519557 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
LINC01603-202ENST00000519557 CFTRP13569 1480 aa13.27□□□□□ -0.29
LINC01603-202ENST00000519557 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
LINC01603-202ENST00000519557 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
LINC01603-202ENST00000519557 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
LINC01603-202ENST00000519557 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
LINC01603-202ENST00000519557 WDR62O43379 1518 aa13.16□□□□□ -0.3
LINC01603-202ENST00000519557 SUPT5HO00267 1087 aaKnown RBP13.15□□□□□ -0.3
LINC01603-202ENST00000519557 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
LINC01603-202ENST00000519557 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
LINC01603-202ENST00000519557 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
LINC01603-202ENST00000519557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC01603-202ENST00000519557 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
LINC01603-202ENST00000519557 TOPBP1Q92547 1522 aa13□□□□□ -0.33
LINC01603-202ENST00000519557 C1QBPQ07021 282 aaKnown RBP12.98□□□□□ -0.33
LINC01603-202ENST00000519557 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
LINC01603-202ENST00000519557 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
LINC01603-202ENST00000519557 ABCC8Q09428 1581 aa12.94□□□□□ -0.34
LINC01603-202ENST00000519557 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
LINC01603-202ENST00000519557 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
LINC01603-202ENST00000519557 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
LINC01603-202ENST00000519557 IFT140Q96RY7 1462 aa12.92□□□□□ -0.34
LINC01603-202ENST00000519557 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
LINC01603-202ENST00000519557 POLA1P09884 1462 aaPredicted RBP12.89□□□□□ -0.35
LINC01603-202ENST00000519557 CUX1P39880 1505 aa12.88□□□□□ -0.35
LINC01603-202ENST00000519557 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
LINC01603-202ENST00000519557 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
LINC01603-202ENST00000519557 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
LINC01603-202ENST00000519557 FGD5Q6ZNL6 1462 aa12.85□□□□□ -0.35
LINC01603-202ENST00000519557 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
LINC01603-202ENST00000519557 SOGA1O94964 1423 aa12.83□□□□□ -0.36
LINC01603-202ENST00000519557 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC01603-202ENST00000519557 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
LINC01603-202ENST00000519557 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
LINC01603-202ENST00000519557 WRNQ14191 1432 aaPredicted RBP eCLIP12.75□□□□□ -0.37
LINC01603-202ENST00000519557 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
LINC01603-202ENST00000519557 SYNJ1O43426 1573 aa12.73□□□□□ -0.37
LINC01603-202ENST00000519557 WDR97A6NE52 1622 aa12.72□□□□□ -0.37
LINC01603-202ENST00000519557 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
LINC01603-202ENST00000519557 BIVM-ERCC5R4GMW8 1640 aa12.71□□□□□ -0.37
LINC01603-202ENST00000519557 FBLN2P98095 1184 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms