RNA–Protein interactions for RNA: ENST00000412710.1

CUBNP1-201, Transcript of cubilin pseudogene 1, humanhuman

BASIC

Gene CUBNP1, Length 1,790 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP1-201ENST00000412710 NISCHQ9Y2I1 1504 aa18.59■□□□□ 0.57
CUBNP1-201ENST00000412710 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
CUBNP1-201ENST00000412710 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
CUBNP1-201ENST00000412710 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
CUBNP1-201ENST00000412710 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
CUBNP1-201ENST00000412710 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
CUBNP1-201ENST00000412710 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
CUBNP1-201ENST00000412710 SUPT5HO00267 1087 aaKnown RBP15.29■□□□□ 0.04
CUBNP1-201ENST00000412710 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
CUBNP1-201ENST00000412710 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
CUBNP1-201ENST00000412710 ABCC9O60706 1549 aa14.91□□□□□ -0.02
CUBNP1-201ENST00000412710 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
CUBNP1-201ENST00000412710 HRCP23327 699 aa14.89□□□□□ -0.03
CUBNP1-201ENST00000412710 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
CUBNP1-201ENST00000412710 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
CUBNP1-201ENST00000412710 NACADO15069 1562 aa14.62□□□□□ -0.07
CUBNP1-201ENST00000412710 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
CUBNP1-201ENST00000412710 PCGF6Q9BYE7 350 aa14.61□□□□□ -0.07
CUBNP1-201ENST00000412710 TRIM26Q12899 539 aaPredicted RBP14.52□□□□□ -0.09
CUBNP1-201ENST00000412710 LOC105371045A0A1W2PR82 267 aa14.5□□□□□ -0.09
CUBNP1-201ENST00000412710 ZEB1P37275 1124 aaPredicted RBP14.37□□□□□ -0.11
CUBNP1-201ENST00000412710 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
CUBNP1-201ENST00000412710 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
CUBNP1-201ENST00000412710 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
CUBNP1-201ENST00000412710 CECR2Q9BXF3 1484 aa14.33□□□□□ -0.12
CUBNP1-201ENST00000412710 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
CUBNP1-201ENST00000412710 PPARGC1BQ86YN6 1023 aaKnown RBP14.29□□□□□ -0.12
CUBNP1-201ENST00000412710 WIZO95785 1651 aa14.26□□□□□ -0.13
CUBNP1-201ENST00000412710 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
CUBNP1-201ENST00000412710 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
CUBNP1-201ENST00000412710 SENP3Q9H4L4 574 aaPredicted RBP14.09□□□□□ -0.15
CUBNP1-201ENST00000412710 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.16
CUBNP1-201ENST00000412710 SMARCA2P51531 1590 aa14.06□□□□□ -0.16
CUBNP1-201ENST00000412710 EEA1Q15075 1411 aa14.05□□□□□ -0.16
CUBNP1-201ENST00000412710 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
CUBNP1-201ENST00000412710 UNC13AQ9UPW8 1703 aa14.02□□□□□ -0.16
CUBNP1-201ENST00000412710 CCDC88BA6NC98 1476 aa14.02□□□□□ -0.17
CUBNP1-201ENST00000412710 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
CUBNP1-201ENST00000412710 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
CUBNP1-201ENST00000412710 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
CUBNP1-201ENST00000412710 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
CUBNP1-201ENST00000412710 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
CUBNP1-201ENST00000412710 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
CUBNP1-201ENST00000412710 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
CUBNP1-201ENST00000412710 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
CUBNP1-201ENST00000412710 SOGA1O94964 1423 aa13.82□□□□□ -0.2
CUBNP1-201ENST00000412710 KIF21BO75037 1637 aa13.81□□□□□ -0.2
CUBNP1-201ENST00000412710 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
CUBNP1-201ENST00000412710 CEP164Q9UPV0 1460 aa13.76□□□□□ -0.21
CUBNP1-201ENST00000412710 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
CUBNP1-201ENST00000412710 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
CUBNP1-201ENST00000412710 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
CUBNP1-201ENST00000412710 RUSC2Q8N2Y8 1516 aa13.71□□□□□ -0.21
CUBNP1-201ENST00000412710 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
CUBNP1-201ENST00000412710 SYNJ1O43426 1573 aa13.7□□□□□ -0.22
CUBNP1-201ENST00000412710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
CUBNP1-201ENST00000412710 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
CUBNP1-201ENST00000412710 TOP2BQ02880 1626 aa13.63□□□□□ -0.23
CUBNP1-201ENST00000412710 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
CUBNP1-201ENST00000412710 UBTFP17480 764 aaKnown RBP13.62□□□□□ -0.23
CUBNP1-201ENST00000412710 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
CUBNP1-201ENST00000412710 CLIP1P30622 1438 aa13.61□□□□□ -0.23
CUBNP1-201ENST00000412710 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
CUBNP1-201ENST00000412710 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
CUBNP1-201ENST00000412710 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
CUBNP1-201ENST00000412710 HMGXB3Q12766 1538 aa13.55□□□□□ -0.24
CUBNP1-201ENST00000412710 CENPBP07199 599 aaPredicted RBP13.55□□□□□ -0.24
CUBNP1-201ENST00000412710 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
CUBNP1-201ENST00000412710 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
CUBNP1-201ENST00000412710 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.25
CUBNP1-201ENST00000412710 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
CUBNP1-201ENST00000412710 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
CUBNP1-201ENST00000412710 NCAPD3P42695 1498 aa13.49□□□□□ -0.25
CUBNP1-201ENST00000412710 NEUROD1Q13562 356 aa13.48□□□□□ -0.25
CUBNP1-201ENST00000412710 APLP2Q06481 763 aa13.42□□□□□ -0.26
CUBNP1-201ENST00000412710 ARAP1Q96P48 1450 aa13.41□□□□□ -0.26
CUBNP1-201ENST00000412710 CUX2O14529 1486 aa13.39□□□□□ -0.27
CUBNP1-201ENST00000412710 CFTRP13569 1480 aa13.39□□□□□ -0.27
CUBNP1-201ENST00000412710 CUX1P39880 1505 aa13.39□□□□□ -0.27
CUBNP1-201ENST00000412710 PRDM2Q13029 1718 aa13.38□□□□□ -0.27
CUBNP1-201ENST00000412710 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
CUBNP1-201ENST00000412710 KIF27Q86VH2 1401 aa13.37□□□□□ -0.27
CUBNP1-201ENST00000412710 RRBP1Q9P2E9 1410 aaKnown RBP13.37□□□□□ -0.27
CUBNP1-201ENST00000412710 MAP3K1Q13233 1512 aa13.34□□□□□ -0.27
CUBNP1-201ENST00000412710 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
CUBNP1-201ENST00000412710 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
CUBNP1-201ENST00000412710 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
CUBNP1-201ENST00000412710 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
CUBNP1-201ENST00000412710 MIER1Q8N108 512 aa13.24□□□□□ -0.29
CUBNP1-201ENST00000412710 MYT1Q01538 1121 aa13.22□□□□□ -0.29
CUBNP1-201ENST00000412710 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.29
CUBNP1-201ENST00000412710 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
CUBNP1-201ENST00000412710 TIAM1Q13009 1591 aa13.19□□□□□ -0.3
CUBNP1-201ENST00000412710 IGF1RP08069 1367 aa13.19□□□□□ -0.3
CUBNP1-201ENST00000412710 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
CUBNP1-201ENST00000412710 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
CUBNP1-201ENST00000412710 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
CUBNP1-201ENST00000412710 LRRC9Q6ZRR7 1453 aa13.12□□□□□ -0.31
CUBNP1-201ENST00000412710 CARMIL1Q5VZK9 1371 aa13.11□□□□□ -0.31
CUBNP1-201ENST00000412710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms