RNA–Protein interactions for RNA: ENST00000398548.5

PRDM15-202, Transcript of PR/SET domain 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM15, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-202ENST00000398548 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.48
PRDM15-202ENST00000398548 SUPT5HO00267 1087 aaKnown RBP17.19■□□□□ 0.34
PRDM15-202ENST00000398548 NISCHQ9Y2I1 1504 aa17.01■□□□□ 0.31
PRDM15-202ENST00000398548 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
PRDM15-202ENST00000398548 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
PRDM15-202ENST00000398548 PELP1Q8IZL8 1130 aaKnown RBP16.55■□□□□ 0.24
PRDM15-202ENST00000398548 APLP2Q06481 763 aa16.42■□□□□ 0.22
PRDM15-202ENST00000398548 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
PRDM15-202ENST00000398548 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
PRDM15-202ENST00000398548 PCGF6Q9BYE7 350 aa16.13■□□□□ 0.17
PRDM15-202ENST00000398548 RANGAP1P46060 587 aaPredicted RBP15.97■□□□□ 0.15
PRDM15-202ENST00000398548 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
PRDM15-202ENST00000398548 ERICH6Q7L0X2 663 aa15.9■□□□□ 0.14
PRDM15-202ENST00000398548 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
PRDM15-202ENST00000398548 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
PRDM15-202ENST00000398548 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
PRDM15-202ENST00000398548 ATP1B4Q9UN42 357 aaPredicted RBP15.85■□□□□ 0.13
PRDM15-202ENST00000398548 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.11
PRDM15-202ENST00000398548 NEFLP07196 543 aa15.59■□□□□ 0.09
PRDM15-202ENST00000398548 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
PRDM15-202ENST00000398548 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
PRDM15-202ENST00000398548 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
PRDM15-202ENST00000398548 MYT1Q01538 1121 aa15.4■□□□□ 0.06
PRDM15-202ENST00000398548 MYT1LQ9UL68 1186 aa15.34■□□□□ 0.05
PRDM15-202ENST00000398548 ITGAEP38570 1179 aa15.31■□□□□ 0.04
PRDM15-202ENST00000398548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
PRDM15-202ENST00000398548 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
PRDM15-202ENST00000398548 HRCP23327 699 aa15.24■□□□□ 0.03
PRDM15-202ENST00000398548 POLR3GLQ9BT43 218 aa15.24■□□□□ 0.03
PRDM15-202ENST00000398548 DAXXQ9UER7 740 aaPredicted RBP15.24■□□□□ 0.03
PRDM15-202ENST00000398548 LOC105371045A0A1W2PR82 267 aa15.22■□□□□ 0.03
PRDM15-202ENST00000398548 CHIC1Q5VXU3 224 aa15.14■□□□□ 0.01
PRDM15-202ENST00000398548 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
PRDM15-202ENST00000398548 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
PRDM15-202ENST00000398548 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
PRDM15-202ENST00000398548 FAM50AQ14320 339 aaKnown RBP14.9□□□□□ -0.02
PRDM15-202ENST00000398548 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
PRDM15-202ENST00000398548 CLSPNQ9HAW4 1339 aa14.84□□□□□ -0.03
PRDM15-202ENST00000398548 TRIM52Q96A61 297 aa14.83□□□□□ -0.03
PRDM15-202ENST00000398548 NEUROD1Q13562 356 aa14.8□□□□□ -0.04
PRDM15-202ENST00000398548 RTL5Q5HYW3 569 aaPredicted RBP14.78□□□□□ -0.04
PRDM15-202ENST00000398548 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
PRDM15-202ENST00000398548 ABCC9O60706 1549 aa14.71□□□□□ -0.05
PRDM15-202ENST00000398548 ANP32CO43423 234 aa14.67□□□□□ -0.06
PRDM15-202ENST00000398548 ZNF326Q5BKZ1 582 aaKnown RBP14.66□□□□□ -0.06
PRDM15-202ENST00000398548 BCANQ96GW7 911 aa14.66□□□□□ -0.06
PRDM15-202ENST00000398548 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
PRDM15-202ENST00000398548 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
PRDM15-202ENST00000398548 FBLN2P98095 1184 aa14.58□□□□□ -0.08
PRDM15-202ENST00000398548 CDK11AQ9UQ88 783 aaPredicted RBP14.57□□□□□ -0.08
PRDM15-202ENST00000398548 SLC24A1O60721 1099 aa14.56□□□□□ -0.08
PRDM15-202ENST00000398548 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
PRDM15-202ENST00000398548 CANXP27824 592 aaKnown RBP14.48□□□□□ -0.09
PRDM15-202ENST00000398548 NEFMP07197 916 aa14.47□□□□□ -0.09
PRDM15-202ENST00000398548 ARID3CA6NKF2 412 aa14.46□□□□□ -0.09
PRDM15-202ENST00000398548 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
PRDM15-202ENST00000398548 BCL11AQ9H165 835 aa14.43□□□□□ -0.1
PRDM15-202ENST00000398548 ZNF777Q9ULD5 760 aaPredicted RBP14.39□□□□□ -0.11
PRDM15-202ENST00000398548 ACIN1Q9UKV3 1341 aaKnown RBP14.37□□□□□ -0.11
PRDM15-202ENST00000398548 ANP32AP39687 249 aaKnown RBP14.33□□□□□ -0.12
PRDM15-202ENST00000398548 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
PRDM15-202ENST00000398548 NPM2Q86SE8 214 aaKnown RBP14.27□□□□□ -0.12
PRDM15-202ENST00000398548 TONSLQ96HA7 1378 aa14.27□□□□□ -0.13
PRDM15-202ENST00000398548 FKBP8Q14318 412 aa14.23□□□□□ -0.13
PRDM15-202ENST00000398548 CHGAP10645 457 aaKnown RBP14.21□□□□□ -0.14
PRDM15-202ENST00000398548 SCRIBQ14160 1630 aa14.21□□□□□ -0.14
PRDM15-202ENST00000398548 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
PRDM15-202ENST00000398548 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRDM15-202ENST00000398548 DDX10Q13206 875 aaKnown RBP14.19□□□□□ -0.14
PRDM15-202ENST00000398548 FAM9BQ8IZU0 186 aa14.18□□□□□ -0.14
PRDM15-202ENST00000398548 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
PRDM15-202ENST00000398548 ANP32BQ92688 251 aaKnown RBP14.14□□□□□ -0.15
PRDM15-202ENST00000398548 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
PRDM15-202ENST00000398548 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
PRDM15-202ENST00000398548 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
PRDM15-202ENST00000398548 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
PRDM15-202ENST00000398548 UPF2Q9HAU5 1272 aaKnown RBP14.12□□□□□ -0.15
PRDM15-202ENST00000398548 TMC1Q8TDI8 760 aa14.09□□□□□ -0.15
PRDM15-202ENST00000398548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
PRDM15-202ENST00000398548 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
PRDM15-202ENST00000398548 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
PRDM15-202ENST00000398548 ZCCHC6Q5VYS8 1495 aaKnown RBP14.04□□□□□ -0.16
PRDM15-202ENST00000398548 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.04□□□□□ -0.16
PRDM15-202ENST00000398548 WDR43Q15061 677 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRDM15-202ENST00000398548 KDM2AQ9Y2K7 1162 aa14.03□□□□□ -0.16
PRDM15-202ENST00000398548 TSPY4P0CV99 314 aa14.02□□□□□ -0.17
PRDM15-202ENST00000398548 TSPY10P0CW01 314 aa14.02□□□□□ -0.17
PRDM15-202ENST00000398548 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
PRDM15-202ENST00000398548 MTUS2Q5JR59 1369 aa14□□□□□ -0.17
PRDM15-202ENST00000398548 EIF5BO60841 1220 aaKnown RBP13.99□□□□□ -0.17
PRDM15-202ENST00000398548 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
PRDM15-202ENST00000398548 NBR1Q14596 966 aa13.95□□□□□ -0.18
PRDM15-202ENST00000398548 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
PRDM15-202ENST00000398548 MIER1Q8N108 512 aa13.94□□□□□ -0.18
PRDM15-202ENST00000398548 CLIP1P30622 1438 aa13.94□□□□□ -0.18
PRDM15-202ENST00000398548 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
PRDM15-202ENST00000398548 IRX6P78412 446 aaPredicted RBP13.92□□□□□ -0.18
PRDM15-202ENST00000398548 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.186e-7■■■■■ 40.3
PRDM15-202ENST00000398548 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
PRDM15-202ENST00000398548 A0A0G2JS52 829 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms