RNA–Protein interactions for RNA: ENST00000531049.1

LINC01559-203, Transcript of long intergenic non-protein coding RNA 1559, humanhuman

TSL 3 BASIC

Gene LINC01559, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559-203ENST00000531049 AEBP2Q6ZN18 517 aaPredicted RBP27.59■■■□□ 2.01
LINC01559-203ENST00000531049 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
LINC01559-203ENST00000531049 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
LINC01559-203ENST00000531049 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
LINC01559-203ENST00000531049 FOXD1Q16676 465 aa22.03■■□□□ 1.12
LINC01559-203ENST00000531049 POTEDQ86YR6 584 aa20.89■□□□□ 0.93
LINC01559-203ENST00000531049 MSH5O43196 834 aa20.76■□□□□ 0.91
LINC01559-203ENST00000531049 PIAS4Q8N2W9 510 aaPredicted RBP20.55■□□□□ 0.88
LINC01559-203ENST00000531049 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
LINC01559-203ENST00000531049 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.85
LINC01559-203ENST00000531049 ADRA2BP18089 450 aa20.27■□□□□ 0.84
LINC01559-203ENST00000531049 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
LINC01559-203ENST00000531049 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
LINC01559-203ENST00000531049 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
LINC01559-203ENST00000531049 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
LINC01559-203ENST00000531049 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
LINC01559-203ENST00000531049 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
LINC01559-203ENST00000531049 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
LINC01559-203ENST00000531049 HOXD11P31277 338 aaPredicted RBP17.79■□□□□ 0.44
LINC01559-203ENST00000531049 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
LINC01559-203ENST00000531049 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
LINC01559-203ENST00000531049 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
LINC01559-203ENST00000531049 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
LINC01559-203ENST00000531049 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
LINC01559-203ENST00000531049 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
LINC01559-203ENST00000531049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC01559-203ENST00000531049 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
LINC01559-203ENST00000531049 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
LINC01559-203ENST00000531049 CAPN15O75808 1086 aa16.51■□□□□ 0.23
LINC01559-203ENST00000531049 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
LINC01559-203ENST00000531049 DSG3P32926 999 aa16.44■□□□□ 0.22
LINC01559-203ENST00000531049 POTEHQ6S545 545 aa16.31■□□□□ 0.2
LINC01559-203ENST00000531049 KCNA4P22459 653 aa16.25■□□□□ 0.19
LINC01559-203ENST00000531049 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
LINC01559-203ENST00000531049 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
LINC01559-203ENST00000531049 ABCB7O75027 752 aa16.1■□□□□ 0.17
LINC01559-203ENST00000531049 APLP2Q06481 763 aa16.09■□□□□ 0.17
LINC01559-203ENST00000531049 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
LINC01559-203ENST00000531049 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
LINC01559-203ENST00000531049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
LINC01559-203ENST00000531049 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
LINC01559-203ENST00000531049 ABCC9O60706 1549 aa15.95■□□□□ 0.14
LINC01559-203ENST00000531049 SAMD1Q6SPF0 538 aaPredicted RBP15.88■□□□□ 0.13
LINC01559-203ENST00000531049 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
LINC01559-203ENST00000531049 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
LINC01559-203ENST00000531049 POLA2Q14181 598 aa15.61■□□□□ 0.09
LINC01559-203ENST00000531049 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
LINC01559-203ENST00000531049 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
LINC01559-203ENST00000531049 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
LINC01559-203ENST00000531049 FOXD4L1Q9NU39 408 aa15.27■□□□□ 0.04
LINC01559-203ENST00000531049 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
LINC01559-203ENST00000531049 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
LINC01559-203ENST00000531049 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
LINC01559-203ENST00000531049 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
LINC01559-203ENST00000531049 NACADO15069 1562 aa15.13■□□□□ 0.01
LINC01559-203ENST00000531049 REM2Q8IYK8 340 aaPredicted RBP15.12■□□□□ 0.01
LINC01559-203ENST00000531049 SP7Q8TDD2 431 aaPredicted RBP15.11■□□□□ 0.01
LINC01559-203ENST00000531049 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
LINC01559-203ENST00000531049 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
LINC01559-203ENST00000531049 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
LINC01559-203ENST00000531049 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
LINC01559-203ENST00000531049 HAX1O00165 279 aa14.92□□□□□ -0.02
LINC01559-203ENST00000531049 ZBTB22O15209 634 aa14.92□□□□□ -0.02
LINC01559-203ENST00000531049 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
LINC01559-203ENST00000531049 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
LINC01559-203ENST00000531049 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.04
LINC01559-203ENST00000531049 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
LINC01559-203ENST00000531049 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.05
LINC01559-203ENST00000531049 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
LINC01559-203ENST00000531049 FBLN2P98095 1184 aa14.74□□□□□ -0.05
LINC01559-203ENST00000531049 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
LINC01559-203ENST00000531049 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
LINC01559-203ENST00000531049 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
LINC01559-203ENST00000531049 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
LINC01559-203ENST00000531049 EVX2Q03828 476 aa14.68□□□□□ -0.06
LINC01559-203ENST00000531049 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
LINC01559-203ENST00000531049 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
LINC01559-203ENST00000531049 PRKAR2AP13861 404 aaKnown RBP14.6□□□□□ -0.07
LINC01559-203ENST00000531049 SPDYE1Q8NFV5 336 aaPredicted RBP14.58□□□□□ -0.08
LINC01559-203ENST00000531049 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
LINC01559-203ENST00000531049 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
LINC01559-203ENST00000531049 SCRIBQ14160 1630 aa14.52□□□□□ -0.08
LINC01559-203ENST00000531049 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
LINC01559-203ENST00000531049 C19orf67A6NJJ6 358 aa14.43□□□□□ -0.1
LINC01559-203ENST00000531049 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
LINC01559-203ENST00000531049 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
LINC01559-203ENST00000531049 CECR2Q9BXF3 1484 aa14.39□□□□□ -0.11
LINC01559-203ENST00000531049 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
LINC01559-203ENST00000531049 GABBR2O75899 941 aa14.32□□□□□ -0.12
LINC01559-203ENST00000531049 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
LINC01559-203ENST00000531049 LHX8Q68G74 356 aa14.18□□□□□ -0.14
LINC01559-203ENST00000531049 CD44P16070 742 aaKnown RBP14.12□□□□□ -0.15
LINC01559-203ENST00000531049 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
LINC01559-203ENST00000531049 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
LINC01559-203ENST00000531049 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
LINC01559-203ENST00000531049 CLCN6P51797 869 aa13.91□□□□□ -0.18
LINC01559-203ENST00000531049 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
LINC01559-203ENST00000531049 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
LINC01559-203ENST00000531049 DCBLD2Q96PD2 775 aa13.9□□□□□ -0.18
LINC01559-203ENST00000531049 SMARCA4P51532 1647 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms